Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq326 149 1e-30
seq279 95.1 2e-14
>seq326
Length=563541
Score = 149 bits (164), Expect = 1e-30
Identities = 350/518 (68%), Gaps = 13/518 (3%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCC-GACGCAAC 42691
|| |||||| ||| ||||| || ||||| || ||||||||| || | || | ||
Sbjct 320303 CCTTGCATCCGGAAAAAGGCTGATTGGGCTATCCGCTGGATCGA-AGACAAAGAGTCTAC 320245
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | || | || || |||||| | || ||||| || ||||||||| || ||||
Sbjct 320244 CTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCTT 320185
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809
|| || ||||||||||| ||| || ||| | ||||| || || ||||| || ||
Sbjct 320184 TGCGTCAATCTTCTGGCTGAAGAAG--CGTGGCCTTATGCCAGGCCTTACCTTTTCCAAT 320127
Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869
|| || ||| | || ||||| | || | ||||| |||||||| || |||||
Sbjct 320126 GAGCTTATCTCTCGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTC---T 320070
Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929
||||| | ||| ||| ||| || | | |||||||| || || || |
Sbjct 320069 CACCTGCGCCACCGCCCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCC 320010
Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGA 42988
|||||| ||||||||||||| | | || ||| || | || |||| |||||| | |
Sbjct 320009 ATCGAGCAGGAGTTCCTCACAGATGCTCT-CCCATGCGCACTTCTCGGAATGAACGCCAA 319951
Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047
||||||||| | |||||| ||| || || || | ||||| || | |||| |
Sbjct 319950 GCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTCGTTGC-TCTGGGCAATA 319892
Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107
|||||||| | | ||| ||||| || ||||| ||||||||| || || |
Sbjct 319891 AGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGGACAACATCTCGCTGACTGGAA 319832
Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||| ||||| || |||||||| || | |||||||||
Sbjct 319831 AGACTAACTTCTTTGAGAAGCGTGTTGGTGACTACCAG 319794
>seq279
Length=233879
Score = 95.1 bits (104), Expect = 2e-14
Identities = 241/364 (66%), Gaps = 2/364 (1%)
Strand=Plus/Plus
Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136
||| |||| || ||||| || ||||| | || | ||||| ||||| | ||||| ||
Sbjct 179953 GTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATGGC 180012
Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGA 245195
| || || || |||||||| ||||||||||| || || | || | ||||| |
Sbjct 180013 AAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGC-AGTGTTATTGAAAA 180071
Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255
||| || |||| || || ||||| || ||| || || || ||||||| ||
Sbjct 180072 CGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAACCAG 180131
Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315
| || | || | | ||| | || | || |||||| ||| || || || || |
Sbjct 180132 TACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGAGCAC 180191
Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375
| | || | |||||| |||||||| |||||||| |||||| | | || ||||
Sbjct 180192 AAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGC 180251
Query 245376 AGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAA 245435
| |||| || ||| |||| ||| | | | |||||| || || || ||| || || |
Sbjct 180252 ACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGA 180311
Query 245436 AGTA 245439
||||
Sbjct 180312 AGTA 180315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944334584542160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |