Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq246 145 2e-29
seq257 116 9e-21
>seq246
Length=239075
Score = 145 bits (160), Expect = 2e-29
Identities = 175/235 (74%), Gaps = 5/235 (2%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || |||||||||| ||| || |||||||||||||| |
Sbjct 189415 CATG-CCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAAT 189473
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | ||| || || || || || | ||||||||| ||||| || || ||||| |||
Sbjct 189474 CCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGG 189533
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| ||||||||||| || ||||| | ||| || || || || | || || | |
Sbjct 189534 GGGGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTAT--CTGAACT 189591
Query 288422 CT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| ||||| || ||||| ||||| |||||||| || || ||||| || ||||||
Sbjct 189592 CTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646
Score = 102 bits (112), Expect = 2e-16
Identities = 156/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || || || | ||| || | |||| ||| || || || ||||| || || |
Sbjct 189646 TCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGA 189705
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || || ||||| || | || || || |||||||| || ||||| || |||||
Sbjct 189706 AAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGG---TCTGG 189762
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| ||||||||||| || ||||||| || ||||| || || | |||| || ||
Sbjct 189763 AGGAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTC 189822
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| || || ||||| ||||| ||||| ||||| |||||||
Sbjct 189823 CACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 189863
>seq257
Length=236519
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||||||||| || ||||| || ||||| || | || || || |||||||||
Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 59067
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| ||||| ||| |||||| || || || ||||| ||||||| || || || ||
Sbjct 59068 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 59127
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||| || || || ||||| ||||| ||||| || || || |||||||||||
Sbjct 59128 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 59186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179648490300098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |