Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq279 150 2e-31 >seq279 Length=233879 Score = 150 bits (166), Expect = 2e-31 Identities = 626/971 (64%), Gaps = 34/971 (4%) Strand=Plus/Plus Query 113698 TTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT 113757 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 178723 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 178779 Query 113758 ---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 113814 ||||||||| || ||| |||| || || ||||| | |||||||| || || Sbjct 178780 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 178839 Query 113815 TTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 113874 |||||||||||| || | | || ||| |||||| | | ||||||||||| | Sbjct 178840 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 178899 Query 113875 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 113934 | || |||| || || | ||||||| ||||| || || ||| || Sbjct 178900 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 178959 Query 113935 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 113994 | | |||||||| | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 178960 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 179018 Query 113995 G-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 114053 ||| ||| || |||||||| || | || | ||||| || | || | | || Sbjct 179019 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATGCT---TAG 179075 Query 114054 TGCGTTCCT---TGAGGGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCAC 114106 | |||| | || | ||||| || || || | || | | ||| ||| Sbjct 179076 CGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACACCC---CAC 179131 Query 114107 ATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCC 114166 |||||| |||| ||||| || || ||| |||| || || ||| ||| |||||||| Sbjct 179132 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 179191 Query 114167 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 114226 ||||||| || | || || ||| | ||||| || ||||| |||||||| Sbjct 179192 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 179251 Query 114227 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAAT 114283 || ||||| |||||| || ||||||||| | ||||| |||| | || Sbjct 179252 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 179308 Query 114284 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT-AGACTTTCG 114342 |||| || ||||| || |||||| | ||||||||||||| | | || | || | Sbjct 179309 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG 179368 Query 114343 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 114402 || ||| || ||||| | || | ||||| | || || || || ||| || Sbjct 179369 -GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGAC 179427 Query 114403 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 114462 | || | ||| || ||||| | ||||| | | | | | ||| || | | Sbjct 179428 TTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGT 179487 Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCT 114520 ||| | ||| || || |||| ||||| |||| ||||| | | || ||| || Sbjct 179488 AGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCA--GTATTCG 179545 Query 114521 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 114580 || || || || || | ||| || || |||| || |||| ||||||||| || ||| Sbjct 179546 ATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTC 179605 Query 114581 GTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 114640 |||| || ||||||||||| ||||| | || | || ||||| ||||| | || |||| Sbjct 179606 TTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGA 179665 Query 114641 ATAGCCTTCCA 114651 ||||| | ||| Sbjct 179666 ATAGCATACCA 179676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350680434280