Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq246 91.5 2e-13 >seq246 Length=239075 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||| | ||||||||||| || |||||||| || | |||||||| | || || Sbjct 189209 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 189268 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||| |||||||| || || || || ||||| || | ||| | | ||||| || | Sbjct 189269 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGG 189328 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 ||||| ||| | | | | || || |||| || || || | ||| || ||| Sbjct 189329 ATTTTAGATTTAACATTATCAATGGTATCGGAGCTC---TCAACTTCAAGCGTAATAGTT 189385 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || || || ||||||||||| Sbjct 189386 TTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417 Score = 86.0 bits (94), Expect = 7e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||| | ||||| || | ||| |||||| |||||||||||||||| Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || |||||||| || ||||| || || ||||||||||| | || Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | || || ||| | || |||| | | | ||| | | | || ||| || ||||| Sbjct 189767 ATGC-CTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCAC 189825 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 || | |||||||| || || || || || || || Sbjct 189826 CTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210145047440