Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq246 91.5 2e-13
>seq246
Length=239075
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/212 (70%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||| ||| | ||||||||||| || |||||||| || | |||||||| | || ||
Sbjct 189209 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 189268
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
||||| |||||||| || || || || ||||| || | ||| | | ||||| || |
Sbjct 189269 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGG 189328
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176
||||| ||| | | | | || || |||| || || || | ||| || |||
Sbjct 189329 ATTTTAGATTTAACATTATCAATGGTATCGGAGCTC---TCAACTTCAAGCGTAATAGTT 189385
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || || || || |||||||||||
Sbjct 189386 TTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417
Score = 86.0 bits (94), Expect = 7e-12
Identities = 150/216 (69%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||| | | ||| | ||||| || | ||| |||||| ||||||||||||||||
Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || |||| || |||||||| || ||||| || || ||||||||||| | ||
Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160
| || || ||| | || |||| | | | ||| | | | || ||| || |||||
Sbjct 189767 ATGC-CTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCAC 189825
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
|| | |||||||| || || || || || || ||
Sbjct 189826 CTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210145047440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |