Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq246 125 7e-24 seq12 86.0 6e-12 >seq246 Length=239075 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || | |||| || || || || ||||| |||||||| | Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||| || |||||||||||||| | || || ||||||||||| |||||| Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || |||||||| ||||||||||| ||| || || | ||||| | ||||| Sbjct 189767 ATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACC 189826 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 |||| || | |||||| ||||| | |||||| |||| Sbjct 189827 TCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 189863 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||| ||||| | | |||||| |||| || | |||||||||| Sbjct 189985 GTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCG 190044 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || || |||||||| |||||||| ||||| || || || ||||| ||| Sbjct 190045 GCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGAATTTTGGACTTG 190104 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||| || | ||||||| | | || ||||| | |||| ||||| ||||| Sbjct 190105 ACACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAGTCTTTCCGGT 190157 >seq12 Length=85050 Score = 86.0 bits (94), Expect = 6e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || ||||||||||| || | || |||||| |||| || ||||| || ||| Sbjct 76182 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCGAGCTGTTTACCG 76123 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || || |||||||||||||| ||||| || || ||| Sbjct 76122 GCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTCT 76078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642357986040