Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq279 134 1e-26
>seq279
Length=233879
Score = 134 bits (148), Expect = 1e-26
Identities = 417/643 (65%), Gaps = 2/643 (0%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | || || | ||||| || ||||||| ||| ||| | || || |||||
Sbjct 180480 AACTACCAATATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGC 180421
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||||| || || || || | ||||| || || || ||||| ||||| |
Sbjct 180420 AAGGTTGCAGAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGAT 180361
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
||| || | || | | | | | |||| | | ||| | || |||| |
Sbjct 180360 GACGTGGAAAGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATG-C 180302
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| | || ||||| |||||||| || || || ||| |||||| | ||||| ||||| ||
Sbjct 180301 CTCTCCTACCCTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCAT 180242
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
| |||| ||| |||| || |||| |||| ||| || ||||| ||
Sbjct 180241 TGATATGAAGGAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAAT 180182
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||||| ||| || || || || | | | ||| | | |||| | ||||||||
Sbjct 180181 TTCAAAGACCGCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTA 180122
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| || || |||||| | || ||||| | || ||||||||||| || ||||| ||
Sbjct 180121 CATTGCTGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAA 180062
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || | ||||| |||||||| ||| | | | || | || || |||| ||
Sbjct 180061 CACTGCCAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCT 180002
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| ||||| ||| | | ||| | || || || || ||||||||||| ||
Sbjct 180001 TGAGCCATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGA 179942
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
| | || | || || ||| || || ||| || || || |||||||||||
Sbjct 179941 AGAAGTTCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACG 179882
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356
||| ||||| || | |||| ||| || ||||| ||||||
Sbjct 179881 CGTTGAGAAGAATGGTGAATGGACTCTGTTCTGTCCAAATGAA 179839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720782040360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |