Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq279 134 1e-26 >seq279 Length=233879 Score = 134 bits (148), Expect = 1e-26 Identities = 417/643 (65%), Gaps = 2/643 (0%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | || || | ||||| || ||||||| ||| ||| | || || ||||| Sbjct 180480 AACTACCAATATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGC 180421 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||||| || || || || | ||||| || || || ||||| ||||| | Sbjct 180420 AAGGTTGCAGAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGAT 180361 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||| || | || | | | | | |||| | | ||| | || |||| | Sbjct 180360 GACGTGGAAAGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATG-C 180302 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || ||||| |||||||| || || || ||| |||||| | ||||| ||||| || Sbjct 180301 CTCTCCTACCCTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCAT 180242 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | |||| ||| |||| || |||| |||| ||| || ||||| || Sbjct 180241 TGATATGAAGGAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAAT 180182 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||||| ||| || || || || | | | ||| | | |||| | |||||||| Sbjct 180181 TTCAAAGACCGCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTA 180122 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || || |||||| | || ||||| | || ||||||||||| || ||||| || Sbjct 180121 CATTGCTGGAACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAA 180062 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || | ||||| |||||||| ||| | | | || | || || |||| || Sbjct 180061 CACTGCCAGATACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCT 180002 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| ||||| ||| | | ||| | || || || || ||||||||||| || Sbjct 180001 TGAGCCATGGCATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGA 179942 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | || || ||| || || ||| || || || ||||||||||| Sbjct 179941 AGAAGTTCGTGCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACG 179882 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 ||| ||||| || | |||| ||| || ||||| |||||| Sbjct 179881 CGTTGAGAAGAATGGTGAATGGACTCTGTTCTGTCCAAATGAA 179839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720782040360