Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq246 102 8e-17
seq326 95.1 1e-14
>seq246
Length=239075
Score = 102 bits (112), Expect = 8e-17
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| | ||| || || | | |||||||| ||||| ||||| ||
Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| |||||| || || || |||| ||||||| ||||| ||||| |||||
Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| |||||||| || || |||| | |||| |||| | | ||| |||| |||||||
Sbjct 189767 ATGCCTTCTTTATCT-TGTATTTTCGACTTAACGTTGT-CGATGGTATCGGATGACTCCA 189824
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|||| | || | || ||||| || |||||||| ||
Sbjct 189825 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
>seq326
Length=563541
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
|| || || || ||||| ||||||| | || | || || || || || || ||
Sbjct 320021 GAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGCACTTCTCGGA 319962
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || ||||||| | |||||||||||||| || ||||| || | || |
Sbjct 319961 ATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTCGT--TG 319904
Query 52734 CTC-GGGCA--GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790
||| ||||| ||||| || |||| || ||| || || || || ||| |||||||
Sbjct 319903 CTCTGGGCAATAAGAAAGT-CTACAACTCTACCAACCCATTCGATTTCATGGACAACATC 319845
Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| || ||||| ||||| || |||||||| || || || ||
Sbjct 319844 TCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTA 319798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259974517520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |