Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq246 102 8e-17 seq326 95.1 1e-14 >seq246 Length=239075 Score = 102 bits (112), Expect = 8e-17 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | ||| || || | | |||||||| ||||| ||||| || Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || |||| ||||||| ||||| ||||| ||||| Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||||||| || || |||| | |||| |||| | | ||| |||| ||||||| Sbjct 189767 ATGCCTTCTTTATCT-TGTATTTTCGACTTAACGTTGT-CGATGGTATCGGATGACTCCA 189824 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || ||||| || |||||||| || Sbjct 189825 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 >seq326 Length=563541 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 || || || || ||||| ||||||| | || | || || || || || || || Sbjct 320021 GAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGCACTTCTCGGA 319962 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||||| || ||||||| | |||||||||||||| || ||||| || | || | Sbjct 319961 ATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTCGT--TG 319904 Query 52734 CTC-GGGCA--GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||| ||||| ||||| || |||| || ||| || || || || ||| ||||||| Sbjct 319903 CTCTGGGCAATAAGAAAGT-CTACAACTCTACCAACCCATTCGATTTCATGGACAACATC 319845 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || ||||| ||||| || |||||||| || || || || Sbjct 319844 TCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTA 319798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259974517520