Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq257 102 8e-17
seq246 96.9 3e-15
>seq257
Length=236519
Score = 102 bits (112), Expect = 8e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || ||||| ||||| | | ||| || || || ||||| || |||||| |||||
Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 59067
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
||||||||||||||||| || || |||||||||||| |||||| ||| | | |||
Sbjct 59068 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 59127
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| ||| || | |||||| |||| ||| | || ||||| || || || || || ||
Sbjct 59128 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 59186
>seq246
Length=239075
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || |||| || |||| ||| | || ||| || || |||||||| ||
Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| ||| || |||||||| ||||| |||| | || |||||||| || ||
Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || |||||| || | | || | ||| || | ||||| |||
Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACT 189370
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | || | |||||||||||||| ||||| || || || ||||||
Sbjct 189371 TCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 189418
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| ||||| ||||| | || ||| ||| || || ||||||||
Sbjct 189449 GTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCG 189508
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | || | |||||||||||||| || ||||| || || | | ||| ||| || ||
Sbjct 189509 GCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTAT-CTTGAATTTTTGATTT 189567
Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094
| ||| || | || || | |||||||||||| | || | || || |||||||| |
Sbjct 189568 AACATTG-TCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGG 189626
Query 127095 TTTTTACAAAAATCTGCAT 127113
|||| || || || |||||
Sbjct 189627 TTTTAACGAAGATTTGCAT 189645
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || ||||| || |||||||||||||| | || ||| || ||
Sbjct 189665 ACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCCTCC 189724
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || ||| |||| | |||||||| || ||||| ||||| || || ||
Sbjct 189725 AGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGT 189784
Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
|||||| ||| | |||| |||| ||| || | ||| || || | ||| | || ||
Sbjct 189785 ATTTTCGACTTAACGTTG-TCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTT 189843
Query 127084 GCCGGTCAGAGTTTTTAC 127101
||||| |||||||| ||
Sbjct 189844 ACCGGTGAGAGTTTTGAC 189861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498475989840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |