Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq246 127 2e-24
seq279 82.4 7e-11
>seq246
Length=239075
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || || ||||||||||||||||||||
Sbjct 189416 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 189475
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | ||| || | ||||||||| ||| | || | || ||||| || ||
Sbjct 189476 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 189535
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| |||||||||||||||||||||||| ||| | || | || || ||| ||||
Sbjct 189536 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 189595
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | || || ||||| || ||||| || || ||||||||
Sbjct 189596 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| || ||||| || || ||||| |||||||| || || | || | |
Sbjct 189203 CTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCA 189262
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||||| || || | || | |||||||| ||||| || || ||||| |||
Sbjct 189263 TCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTA 189322
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| ||||| ||| | || | ||| ||||| ||| ||||| || ||||
Sbjct 189323 TCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATA 189382
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||||||||| || ||||| || || ||||||||
Sbjct 189383 GTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| || || | | || | || || || || ||||| || ||||| |||||
Sbjct 189644 ATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCA 189703
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | || |||| || || || ||| | || | || |||||||| ||
Sbjct 189704 GAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGA 189763
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|||||||||||||||||||| | |||| | | | || | || | ||| ||||| |||||
Sbjct 189764 GGAATGCCTTCTTTATCTTGTA-TTTTCGACTTAACGTTGTCGATGGTATCGGATGACTC 189822
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| || || || | || || ||||| |||||||| ||
Sbjct 189823 CACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
>seq279
Length=233879
Score = 82.4 bits (90), Expect = 7e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 123624 ATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAA 123683
||||||||||| || || ||||||| ||| | ||| || | ||| |||| || || | |
Sbjct 179631 ATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGA 179572
Query 123684 TGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGT 123743
| ||||| ||| |||| || ||||||||| || | ||| |||| || || |||
Sbjct 179571 AGCTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGT 179512
Query 123744 AATTTGGCTTCGATT 123758
|| |||||||| |||
Sbjct 179511 AACTTGGCTTCCATT 179497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000990834360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |