Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq246 127 2e-24 seq279 82.4 7e-11 >seq246 Length=239075 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || |||||||||||||||||||| Sbjct 189416 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 189475 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| || | ||||||||| ||| | || | || ||||| || || Sbjct 189476 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 189535 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||||||||||||||||||| ||| | || | || || ||| |||| Sbjct 189536 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 189595 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | || || ||||| || ||||| || || |||||||| Sbjct 189596 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||| || ||||| || || ||||| |||||||| || || | || | | Sbjct 189203 CTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCA 189262 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||||| || || | || | |||||||| ||||| || || ||||| ||| Sbjct 189263 TCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTA 189322 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| ||| | || | ||| ||||| ||| ||||| || |||| Sbjct 189323 TCTTGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATA 189382 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||| || ||||| || || |||||||| Sbjct 189383 GTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | | || | || || || || ||||| || ||||| ||||| Sbjct 189644 ATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCA 189703 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || |||| || || || ||| | || | || |||||||| || Sbjct 189704 GAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGA 189763 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||||||||||||||| | |||| | | | || | || | ||| ||||| ||||| Sbjct 189764 GGAATGCCTTCTTTATCTTGTA-TTTTCGACTTAACGTTGTCGATGGTATCGGATGACTC 189822 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || || || || | || || ||||| |||||||| || Sbjct 189823 CACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 >seq279 Length=233879 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 123624 ATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAA 123683 ||||||||||| || || ||||||| ||| | ||| || | ||| |||| || || | | Sbjct 179631 ATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGA 179572 Query 123684 TGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGT 123743 | ||||| ||| |||| || ||||||||| || | ||| |||| || || ||| Sbjct 179571 AGCTCCAATCTATGCACCGAGATCATCGAATACTGCTCACCTGATGAAGTTGCTGTTTGT 179512 Query 123744 AATTTGGCTTCGATT 123758 || |||||||| ||| Sbjct 179511 AACTTGGCTTCCATT 179497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000990834360