Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq279 159 4e-34 >seq279 Length=233879 Score = 159 bits (176), Expect = 4e-34 Identities = 629/971 (65%), Gaps = 34/971 (4%) Strand=Plus/Plus Query 115659 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 115718 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 178723 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 178779 Query 115719 ---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 115775 ||||||||| || ||| |||| || || ||||| | |||||||| || || Sbjct 178780 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 178839 Query 115776 TTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 115835 |||||| ||||| || | | || ||| |||||| | | ||||||||||| | Sbjct 178840 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 178899 Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 115895 | | || |||| || || | ||||||| ||||| || || ||| || Sbjct 178900 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 178959 Query 115896 TCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 115955 | | ||||| || | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 178960 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 179018 Query 115956 T-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAA 116014 | ||| ||| || |||||||| || | || | |||||||| | | || || | Sbjct 179019 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAA----CTCCATGCTTA 179074 Query 116015 TGCGTTCC-----TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC--TCCCCCTCCCAC 116067 ||| || || || | ||||| || || || | || | | | ||||| Sbjct 179075 -GCGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCAC 179131 Query 116068 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 116127 |||||| |||| ||||| || || || |||| || || ||| ||| ||||||||| Sbjct 179132 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 179191 Query 116128 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 116187 ||||||| || | || || ||| | ||||| || ||||| |||||||| Sbjct 179192 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 179251 Query 116188 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAAT 116244 || ||||| |||||| || ||||||||| | || || |||| | || Sbjct 179252 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 179308 Query 116245 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCG 116303 |||| || ||||| || |||||| | ||||||||||||| | | || | || | Sbjct 179309 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG 179368 Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363 || ||| || ||||| | || | ||||| | || || || || ||| || Sbjct 179369 -GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGAC 179427 Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 116423 | || | ||| || ||||| | ||||| | | | | | ||| || | | Sbjct 179428 TTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGT 179487 Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC--TTATCAGTGTACTCT 116481 ||| | ||| || || |||| ||||| |||| ||||| | | |||| | || Sbjct 179488 AGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCG 179545 Query 116482 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 116541 || || || || || | ||| || || |||| || |||| ||||||||| || ||| Sbjct 179546 ATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTC 179605 Query 116542 GTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 116601 |||| || |||||||||||||||||| | || | || ||||| ||||| | || |||| Sbjct 179606 TTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGA 179665 Query 116602 ATAGCCTTCCA 116612 ||||| | ||| Sbjct 179666 ATAGCATACCA 179676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504201483560