Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq279 159 4e-34
>seq279
Length=233879
Score = 159 bits (176), Expect = 4e-34
Identities = 629/971 (65%), Gaps = 34/971 (4%)
Strand=Plus/Plus
Query 115659 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 115718
||| ||||| ||||||||| || ||||| || ||||| | || || || ||| ||
Sbjct 178723 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 178779
Query 115719 ---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 115775
||||||||| || ||| |||| || || ||||| | |||||||| || ||
Sbjct 178780 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 178839
Query 115776 TTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 115835
|||||| ||||| || | | || ||| |||||| | | ||||||||||| |
Sbjct 178840 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 178899
Query 115836 CTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 115895
| | || |||| || || | ||||||| ||||| || || ||| ||
Sbjct 178900 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 178959
Query 115896 TCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 115955
| | ||||| || | ||||| || || ||||| || ||| | |||||| | |||
Sbjct 178960 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 179018
Query 115956 T-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAA 116014
| ||| ||| || |||||||| || | || | |||||||| | | || || |
Sbjct 179019 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAA----CTCCATGCTTA 179074
Query 116015 TGCGTTCC-----TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC--TCCCCCTCCCAC 116067
||| || || || | ||||| || || || | || | | | |||||
Sbjct 179075 -GCGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCAC 179131
Query 116068 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 116127
|||||| |||| ||||| || || || |||| || || ||| ||| |||||||||
Sbjct 179132 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 179191
Query 116128 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATG 116187
||||||| || | || || ||| | ||||| || ||||| ||||||||
Sbjct 179192 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 179251
Query 116188 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAAT 116244
|| ||||| |||||| || ||||||||| | || || |||| | ||
Sbjct 179252 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 179308
Query 116245 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCG 116303
|||| || ||||| || |||||| | ||||||||||||| | | || | || |
Sbjct 179309 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG 179368
Query 116304 AGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC 116363
|| ||| || ||||| | || | ||||| | || || || || ||| ||
Sbjct 179369 -GCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGAC 179427
Query 116364 CTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTT 116423
| || | ||| || ||||| | ||||| | | | | | ||| || | |
Sbjct 179428 TTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGT 179487
Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC--TTATCAGTGTACTCT 116481
||| | ||| || || |||| ||||| |||| ||||| | | |||| | ||
Sbjct 179488 AGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCG 179545
Query 116482 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 116541
|| || || || || | ||| || || |||| || |||| ||||||||| || |||
Sbjct 179546 ATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTC 179605
Query 116542 GTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 116601
|||| || |||||||||||||||||| | || | || ||||| ||||| | || ||||
Sbjct 179606 TTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGA 179665
Query 116602 ATAGCCTTCCA 116612
||||| | |||
Sbjct 179666 ATAGCATACCA 179676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613504201483560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |