Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq246 122 2e-22
seq12 104 6e-17
>seq246
Length=239075
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| ||||| |||||||| || | ||||| |||| | || | || ||
Sbjct 189662 AGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGACCGTCC 189721
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||| || ||||||||||| ||| ||| |||||| ||
Sbjct 189722 TCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCT 189781
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || || ||| ||| |||| ||| || | || || || || | ||||| |||
Sbjct 189782 TGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTC 189841
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
||||| ||||||||||| ||
Sbjct 189842 TTACCGGTGAGAGTTTTGAC 189861
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || ||||| ||||||||||||| || || || | | ||| | |||||
Sbjct 189434 AGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCC 189493
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || || ||||||||||| || || |||||||| || || || |||||| ||
Sbjct 189494 TCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCT 189553
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
||||| ||| || || || | || |||| | || || || | ||||| |||
Sbjct 189554 TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTC 189613
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || ||||| || || |||||
Sbjct 189614 TTTCCGGTCAGGGTTTTAACGAAGATTTG 189642
>seq12
Length=85050
Score = 104 bits (114), Expect = 6e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||| |||||||| ||||||||||| || | ||||||||||| | ||
Sbjct 76206 CGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTG 76147
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || ||||| || ||||||||||| ||||| |||||||| ||| |||||
Sbjct 76146 CGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCC 76087
Query 199529 TC 199530
||
Sbjct 76086 TC 76085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178915693971197
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |