Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq4 132 4e-25 >seq4 Length=94551 Score = 132 bits (146), Expect = 4e-25 Identities = 880/1395 (63%), Gaps = 31/1395 (2%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || || || | ||||| |||||||| |||||||| || || | | || || Sbjct 74083 ATACCGTTCGCGTCGACGTCAAAGGTGACTTCGATTTGAGGAACGCCACGGGGCGCGGGG 74142 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | || | || || || ||||| || ||| |||||| Sbjct 74143 GGGATACCGGTTAGCTCGAACTTGCCGAGGAGGTTGTTATCCTTGGTGCGGGCACGTTCA 74202 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 ||||| || | ||||| || | | || || || | | ||| || | | ||| Sbjct 74203 CCCTCAAAGACCTGGATGAGCACGCCTGGCTGGTTGTCGGCA-AAGGTGGAGAACGTCTC 74261 Query 517454 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 || || || || || || |||||||| | || | |||||| | ||||| || Sbjct 74262 AGACTTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGC 74321 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570 || || | ||| | ||| ||||||| ||| |||| || | || | || | || || Sbjct 74322 AGTCTCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTT 74381 Query 517571 TCA--TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 517627 | || || | |||| |||||| | || || || | || ||||||||||||||||| Sbjct 74382 GGACGTC-GTGTCACCAGACAAGA-TGGCGGCCTGGACGGCGGCACCATATGCAACAGCC 74439 Query 517628 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 517687 || || || || | | | ||| | | || || ||||| || | || | ||| | | Sbjct 74440 TCGTCGGGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCT-T 74498 Query 517688 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 517746 || | || ||||| | ||||| || || | || || ||||| || ||||| Sbjct 74499 CTGGATGCGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTT 74558 Query 517747 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTC 517806 ||| | |||| ||| | || ||||| || || | | | || | ||| Sbjct 74559 ATCGATCTTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTC 74618 Query 517807 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 517866 ||||| || ||||| ||| | ||| | | | || ||||||| || ||| | Sbjct 74619 CTGGCAAAGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTA 74678 Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926 | || || | ||| || | || || | | ||| || || | || || |||||||| Sbjct 74679 TAGGGAGTCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTC 74738 Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC---TGATTGATTCAAATCTGTTTTATA 517983 || || || | || | || | ||| || ||| ||| | ||| | || | Sbjct 74739 GCAGGCAGTGCGGAGACGGCGGAGGGCACGAGCATTTGAA-GAT--AGATCCTTCTTGTG 74795 Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043 || | |||||| || | ||| | | || || || ||||| ||||| ||||| || Sbjct 74796 CTTGCGCTTGAATTCATTGACAAAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACC 74855 Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103 | | || | || | || | | |||| ||| | || ||||| | || | || Sbjct 74856 AAGATGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAG 74915 Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163 | |||||| ||| |||||||||| || || || || || || ||| || Sbjct 74916 GGAGACATCAAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGTTCACCCTCGGC 74975 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || || ||||||||||| |||| || |||||||| ||||| || ||||| | | || Sbjct 74976 CTTCTTGTCAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGAC 75035 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| || ||||| || || ||||| || || ||||| | || |||||||| ||||| Sbjct 75036 ATTCAGGCCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATA 75095 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 || || ||||||| ||||| | | ||| |||| || | || |||| Sbjct 75096 GGCGGGGACAGTAACGACGGCGTTGTTAACTGTGCCTCCAAGGTAGGACTCGGCAGTTTC 75155 Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATT 518403 | |||| || | | | ||| || || |||| || |||| | ||||| ||| Sbjct 75156 TCTCATCTTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGCC 75215 Query 518404 TTGATATGATACTTCAA--AATATG-GTTTATTACCAACATT---AATAACTTTAAATGG 518457 | ||| || |||| | ||| | || || | || ||| || || || || Sbjct 75216 CT----TGA-AC-TCAACGGAGATGACTGGCTTTCCCGCCTTGTCAATGACCTTGAAGGG 75269 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTT 518516 ||| ||||| || ||||| || || || || || | | ||||| | || | Sbjct 75270 GAAGTGCTTCATGTCGGATTGGAC-CTCAGGATCGGCGAATTTGCGGCCAATGAGACGCT 75328 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576 | || ||||| | || |||| || || || || |||||| |||||| ||||| || | Sbjct 75329 TGGCGTCAAAGACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCGA 75388 Query 518577 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 ||||| | || || ||||| || | ||| | || || || || || ||||| || || | Sbjct 75389 TCAGACGCTCGGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCGT 75448 Query 518637 TCGCAATAATTTCAA 518651 | ||||| ||||||| Sbjct 75449 TGGCAATGATTTCAA 75463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780802997292046