Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4 441 9e-119 seq329 159 4e-34 seq90 134 2e-26 seq190 105 8e-18 >seq4 Length=94551 Score = 441 bits (488), Expect = 9e-119 Identities = 863/1262 (68%), Gaps = 15/1262 (1%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || || || || |||||| || | |||||||| | |||||| ||| Sbjct 74266 TTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGCAGTC 74325 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 |||| || | ||||||||| | ||||| | ||| | | || | ||| | | | Sbjct 74326 TCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTTGGAC 74385 Query 7007 --CCT-TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063 | | ||||| | ||||||||||| ||||| | || || ||||| || ||||| ||| Sbjct 74386 GTCGTGTCACCAGACAAGATGGCGGCCTGGACGGCGGCACCATATGCAACAGCCTCGTCG 74445 Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123 ||||| || | || || | || || ||||| || | || |||| | | || || Sbjct 74446 GGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCTTCTGGATG 74505 Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183 ||||| || || |||||||| || | || || |||| || | |||||||||||| Sbjct 74506 CGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTTATCGATC 74565 Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243 |||| || || || || ||||| ||||| ||||| | |||| || Sbjct 74566 TTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTCCTGGCAA 74625 Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| ||||| || ||||| ||||||||||||| ||| ||||||| || Sbjct 74626 AGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTATAGGGAG 74685 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 || ||||| |||| ||| ||||| | || || | || ||||| || || || || || Sbjct 74686 TCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTCGCAGGCA 74745 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 || || | ||| || |||||||| | || || | ||| ||||| || || || || Sbjct 74746 GTGCGGAGACGGCGGAGGGCACGAGCATTTGAAGATAGATCCTTCTTGTGCTTGCGCTTG 74805 Query 7424 AACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 || || || | | ||||| | ||| | ||||||||| |||||||| | || || Sbjct 74806 AATTCATTGACA-AAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACCAAGATGGGT 74864 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || || || | |||||||| ||||| || |||| || | | | || ||||| Sbjct 74865 GTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAGGGAGACATC 74924 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTTAT 7601 ||| ||||||||||||| ||| || ||||| ||||| ||| || | || ||||| | Sbjct 74925 AAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGT-TCACCCTCGGCCTTCTTGT 74983 Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGG 7660 | ||||| || || || || || || || ||||| || ||||| ||||| ||| |||||| Sbjct 74984 CAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGACA-TTCAGG 75042 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || | ||||| || || ||||| || || |||||||| || ||||| ||| Sbjct 75043 CCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATAGGCGGGG 75102 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | ||| | || || || || || || | ||| |||| Sbjct 75103 ACAGTAACGACGGCGTTGTTAACTGTGCCTCCAAGGTAGGACTCGGCAGTTTCTCTCATC 75162 Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAA 7840 || || || ||||| || || || || || | | ||||| ||| ||| || || || Sbjct 75163 TTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGCCCTTGAAC 75222 Query 7841 TCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTC 7900 ||||| || | || || || | || | || ||||| | | | | ||| Sbjct 75223 TCAACGGAGATGACTGGCTT-TC--CCGCCTTGTCAATGACCTTGAAGGGGAAGTGCTTC 75279 Query 7901 ATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAA 7960 || ||| |||||||| | || | || || | || || |||||||| || ||||| Sbjct 75280 ATGTCGGATTGGACCTCAGGATCGGCGAATTTGCGGCCAATGAGACGCTTGGCGTCAAAG 75339 Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020 |||||||| |||||||||||| ||| || || || || |||||||| ||||| || Sbjct 75340 ACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCGATCAGACGCTC- 75398 Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080 | || || || || ||| |||| || || || || || || |||||||| ||||| Sbjct 75399 --GGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCGTTGGCAATG 75456 Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140 ||||| | | ||| | | ||| || |||||||| ||||| || || | ||| ||| Sbjct 75457 ATTTCAATTCTGTCATCCCGGAAGATACCCACGCACGAGTACGTGGTCCCGAGATCGATA 75516 Query 8141 CC 8142 || Sbjct 75517 CC 75518 >seq329 Length=219717 Score = 159 bits (176), Expect = 4e-34 Identities = 234/328 (71%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||||||||| || || || || || || ||| || ||| || Sbjct 145499 TCGAAATCTTCACCACCCAAGTGGGTGTCACCGGCTGTAGCCAGGACCTCGAAGGCGCCG 145440 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | ||||| ||||| ||||| ||||| || ||| | | || | Sbjct 145439 TTGTCGATGGACAGAAGAGAAACGTCAAAGGTACCTCCACCGAGATCATAGACGATGA-- 145382 Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || ||||| | ||||||| |||||||| |||||||| || || || ||||| Sbjct 145381 -TC-TGGCGCTCGTCCCCGGTCTTATCCAGACCGTATGCGATAGCGGCGGCGGTGGGTTC 145324 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | | ||| ||| ||| ||||||||||| || | ||||| || || || |||| Sbjct 145323 GTTGACGACACGGAGAACGTTGAGGCCAGCAATGGTGCCGGCATCCTTGGTAGCCTGTCT 145264 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || |||||| |||||||| || || || ||||| |||| ||||| |||| ||||| Sbjct 145263 CTGGTTATCGTTGAAGTAGGCGGGAACAGTAACGACGGCGTTGGTGACAGTCTTTCCGAG 145204 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783 || || |||| |||||||||||| Sbjct 145203 GTAGTTCTCAGCGACCTCTTTCATTTTG 145176 >seq90 Length=319458 Score = 134 bits (148), Expect = 2e-26 Identities = 279/407 (69%), Gaps = 9/407 (2%) Strand=Plus/Minus Query 11281 TCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCT 11340 ||||||| ||| || || || ||||| | || || ||||||| || || ||| || | Sbjct 219407 TCAAATCGACCAGGTCGCAACAACGCCTTATCTAGGATATCGACTCGATTGGTTCCAGCC 219348 Query 11341 ATAACAACAATTTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTTAATT 11400 | ||| |||| || | | | ||| ||||||||||| || | | || || | | Sbjct 219347 AGAACCACAACTTGATCCGAGGTGTTGAAGCCATCCATTTCGGTCAGGATCTGATTCAAT 219288 Query 11401 GTTTGTTCACGCTCATCGTTTGCCGCAA---ACCCATTCATACTTCTTTTCTTACCAATC 11457 || || |||||||| ||| | || | | ||| | ||| ||| ||||| Sbjct 219287 GTGCTCTCGCGCTCATCATTTCCACCACCATAAGCGTTCTTCGATCTCGACTTTCCAATA 219228 Query 11458 GCATCAATTTCATCTATAAAGATAATACACGGT-TGATTTTCACGTGCCAATTCAAATAT 11516 |||||||| ||||| || || |||||||| ||| || ||||| || || | |||| | Sbjct 219227 GCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGGTTGCAAACAG 219169 Query 11517 ATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCC-CGAAC 11575 ||||||||||| | ||| ||||| |||||||| || |||||| ||||| | ||| Sbjct 219168 ATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAACTCAGACCCGCTAAC 219109 Query 11576 ACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTG 11635 ||| | ||| |||||| || || || ||| |||| ||||| | || ||||| | Sbjct 219108 GCTGTA-AAATGGAACGCCTGACTCGCCAGCTGTAGCCTTTGCTAGCAACGTCTTACCGG 219050 Query 11636 TACCTGGTTTACCTGTTAATAAT-GCACCCCTTGGTATTTTAGCACC 11681 |||| ||| |||| || ||| ||||| || || || || ||||| Sbjct 219049 TACCCGGTGGCCCTG-AAAGAATAGCACCTCTGGGGATCTTGGCACC 219004 >seq190 Length=258357 Score = 105 bits (116), Expect = 8e-18 Identities = 226/331 (68%), Gaps = 14/331 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | || || || || ||| | |||||||| || | ||| Sbjct 249397 ATCGAAGTCCTCACCACCAAGATGAGTGTCACCATTGGTAGACTTGACTTCGAACACACC 249456 Query 7516 TCCTTCAATGTTT-AACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| ||| || || | | | ||||| ||||||||||| || || | | | Sbjct 249457 --CTTCTGGATTTCAAGAATGGAGATGTCAAAAGTACCACCACCAAGATCGTAGACGGCC 249514 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | ||| | || | || |||||||||| || | ||| || || || || Sbjct 249515 ACGATGCGATCCTGCTC---GCGCT---CGAGACCGTAGGCAAGAGCAGCAGCGGTAGGC 249568 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 ||||| | || ||| ||| ||| || || || || ||| | |||||||| || |||| Sbjct 249569 TCATTGACAACACGGAGAACGTTGAGACCGGCGAT--TTGACCGGCATCTTTGGTAGCTT 249626 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| ||||| || |||||||| ||||| || ||||| | | | |||| || | Sbjct 249627 GACGTTGAGAATCATTGAAGTAGGCGGGGACTGTGACGACACCATTCTTGACGGGTTTGC 249686 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782 | ||||| | ||| || | || |||||||| Sbjct 249687 CAAGATAGGCTTCAGCAGTCTCCTTCATTTT 249717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129695788440