Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq4 441 9e-119
seq329 159 4e-34
seq90 134 2e-26
seq190 105 8e-18
>seq4
Length=94551
Score = 441 bits (488), Expect = 9e-119
Identities = 863/1262 (68%), Gaps = 15/1262 (1%)
Strand=Plus/Plus
Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946
||||| | || || || || |||||| || | |||||||| | |||||| |||
Sbjct 74266 TTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGCAGTC 74325
Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006
|||| || | ||||||||| | ||||| | ||| | | || | ||| | | |
Sbjct 74326 TCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTTGGAC 74385
Query 7007 --CCT-TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCG 7063
| | ||||| | ||||||||||| ||||| | || || ||||| || ||||| |||
Sbjct 74386 GTCGTGTCACCAGACAAGATGGCGGCCTGGACGGCGGCACCATATGCAACAGCCTCGTCG 74445
Query 7064 GGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATT 7123
||||| || | || || | || || ||||| || | || |||| | | || ||
Sbjct 74446 GGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCTTCTGGATG 74505
Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATC 7183
||||| || || |||||||| || | || || |||| || | ||||||||||||
Sbjct 74506 CGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTTATCGATC 74565
Query 7184 TTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACAC 7243
|||| || || || || ||||| ||||| ||||| | |||| ||
Sbjct 74566 TTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTCCTGGCAA 74625
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| ||||| || ||||| ||||||||||||| ||| ||||||| ||
Sbjct 74626 AGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTATAGGGAG 74685
Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363
|| ||||| |||| ||| ||||| | || || | || ||||| || || || || ||
Sbjct 74686 TCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTCGCAGGCA 74745
Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423
|| || | ||| || |||||||| | || || | ||| ||||| || || || ||
Sbjct 74746 GTGCGGAGACGGCGGAGGGCACGAGCATTTGAAGATAGATCCTTCTTGTGCTTGCGCTTG 74805
Query 7424 AACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482
|| || || | | ||||| | ||| | ||||||||| |||||||| | || ||
Sbjct 74806 AATTCATTGACA-AAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACCAAGATGGGT 74864
Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542
|| || || || | |||||||| ||||| || |||| || | | | || |||||
Sbjct 74865 GTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAGGGAGACATC 74924
Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTTAT 7601
||| ||||||||||||| ||| || ||||| ||||| ||| || | || ||||| |
Sbjct 74925 AAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGT-TCACCCTCGGCCTTCTTGT 74983
Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGG 7660
| ||||| || || || || || || || ||||| || ||||| ||||| ||| ||||||
Sbjct 74984 CAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGACA-TTCAGG 75042
Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720
||||| || | ||||| || || ||||| || || |||||||| || ||||| |||
Sbjct 75043 CCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATAGGCGGGG 75102
Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780
|| || ||||| |||| | ||| | || || || || || || | ||| ||||
Sbjct 75103 ACAGTAACGACGGCGTTGTTAACTGTGCCTCCAAGGTAGGACTCGGCAGTTTCTCTCATC 75162
Query 7781 TTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAA 7840
|| || || ||||| || || || || || | | ||||| ||| ||| || || ||
Sbjct 75163 TTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGCCCTTGAAC 75222
Query 7841 TCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTC 7900
||||| || | || || || | || | || ||||| | | | | |||
Sbjct 75223 TCAACGGAGATGACTGGCTT-TC--CCGCCTTGTCAATGACCTTGAAGGGGAAGTGCTTC 75279
Query 7901 ATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAA 7960
|| ||| |||||||| | || | || || | || || |||||||| || |||||
Sbjct 75280 ATGTCGGATTGGACCTCAGGATCGGCGAATTTGCGGCCAATGAGACGCTTGGCGTCAAAG 75339
Query 7961 ACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCA 8020
|||||||| |||||||||||| ||| || || || || |||||||| ||||| ||
Sbjct 75340 ACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCGATCAGACGCTC- 75398
Query 8021 TTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATA 8080
| || || || || ||| |||| || || || || || || |||||||| |||||
Sbjct 75399 --GGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCGTTGGCAATG 75456
Query 8081 ATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATA 8140
||||| | | ||| | | ||| || |||||||| ||||| || || | ||| |||
Sbjct 75457 ATTTCAATTCTGTCATCCCGGAAGATACCCACGCACGAGTACGTGGTCCCGAGATCGATA 75516
Query 8141 CC 8142
||
Sbjct 75517 CC 75518
>seq329
Length=219717
Score = 159 bits (176), Expect = 4e-34
Identities = 234/328 (71%), Gaps = 5/328 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||||||||||||||| || || || || || || ||| || ||| ||
Sbjct 145499 TCGAAATCTTCACCACCCAAGTGGGTGTCACCGGCTGTAGCCAGGACCTCGAAGGCGCCG 145440
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| ||| | | ||||| ||||| ||||| ||||| || ||| | | || |
Sbjct 145439 TTGTCGATGGACAGAAGAGAAACGTCAAAGGTACCTCCACCGAGATCATAGACGATGA-- 145382
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || ||||| | ||||||| |||||||| |||||||| || || || |||||
Sbjct 145381 -TC-TGGCGCTCGTCCCCGGTCTTATCCAGACCGTATGCGATAGCGGCGGCGGTGGGTTC 145324
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | | ||| ||| ||| ||||||||||| || | ||||| || || || ||||
Sbjct 145323 GTTGACGACACGGAGAACGTTGAGGCCAGCAATGGTGCCGGCATCCTTGGTAGCCTGTCT 145264
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| |||||| |||||||| || || || ||||| |||| ||||| |||| |||||
Sbjct 145263 CTGGTTATCGTTGAAGTAGGCGGGAACAGTAACGACGGCGTTGGTGACAGTCTTTCCGAG 145204
Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783
|| || |||| ||||||||||||
Sbjct 145203 GTAGTTCTCAGCGACCTCTTTCATTTTG 145176
>seq90
Length=319458
Score = 134 bits (148), Expect = 2e-26
Identities = 279/407 (69%), Gaps = 9/407 (2%)
Strand=Plus/Minus
Query 11281 TCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCT 11340
||||||| ||| || || || ||||| | || || ||||||| || || ||| || |
Sbjct 219407 TCAAATCGACCAGGTCGCAACAACGCCTTATCTAGGATATCGACTCGATTGGTTCCAGCC 219348
Query 11341 ATAACAACAATTTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTTAATT 11400
| ||| |||| || | | | ||| ||||||||||| || | | || || | |
Sbjct 219347 AGAACCACAACTTGATCCGAGGTGTTGAAGCCATCCATTTCGGTCAGGATCTGATTCAAT 219288
Query 11401 GTTTGTTCACGCTCATCGTTTGCCGCAA---ACCCATTCATACTTCTTTTCTTACCAATC 11457
|| || |||||||| ||| | || | | ||| | ||| ||| |||||
Sbjct 219287 GTGCTCTCGCGCTCATCATTTCCACCACCATAAGCGTTCTTCGATCTCGACTTTCCAATA 219228
Query 11458 GCATCAATTTCATCTATAAAGATAATACACGGT-TGATTTTCACGTGCCAATTCAAATAT 11516
|||||||| ||||| || || |||||||| ||| || ||||| || || | |||| |
Sbjct 219227 GCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGGTTGCAAACAG 219169
Query 11517 ATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCC-CGAAC 11575
||||||||||| | ||| ||||| |||||||| || |||||| ||||| | |||
Sbjct 219168 ATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAACTCAGACCCGCTAAC 219109
Query 11576 ACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTG 11635
||| | ||| |||||| || || || ||| |||| ||||| | || ||||| |
Sbjct 219108 GCTGTA-AAATGGAACGCCTGACTCGCCAGCTGTAGCCTTTGCTAGCAACGTCTTACCGG 219050
Query 11636 TACCTGGTTTACCTGTTAATAAT-GCACCCCTTGGTATTTTAGCACC 11681
|||| ||| |||| || ||| ||||| || || || || |||||
Sbjct 219049 TACCCGGTGGCCCTG-AAAGAATAGCACCTCTGGGGATCTTGGCACC 219004
>seq190
Length=258357
Score = 105 bits (116), Expect = 8e-18
Identities = 226/331 (68%), Gaps = 14/331 (4%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|||||| || |||||||| | || || || || ||| | |||||||| || | |||
Sbjct 249397 ATCGAAGTCCTCACCACCAAGATGAGTGTCACCATTGGTAGACTTGACTTCGAACACACC 249456
Query 7516 TCCTTCAATGTTT-AACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| ||| || || | | | ||||| ||||||||||| || || | | |
Sbjct 249457 --CTTCTGGATTTCAAGAATGGAGATGTCAAAAGTACCACCACCAAGATCGTAGACGGCC 249514
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
||| | ||| | || | || |||||||||| || | ||| || || || ||
Sbjct 249515 ACGATGCGATCCTGCTC---GCGCT---CGAGACCGTAGGCAAGAGCAGCAGCGGTAGGC 249568
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691
||||| | || ||| ||| ||| || || || || ||| | |||||||| || ||||
Sbjct 249569 TCATTGACAACACGGAGAACGTTGAGACCGGCGAT--TTGACCGGCATCTTTGGTAGCTT 249626
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751
| ||||| ||||| || |||||||| ||||| || ||||| | | | |||| || |
Sbjct 249627 GACGTTGAGAATCATTGAAGTAGGCGGGGACTGTGACGACACCATTCTTGACGGGTTTGC 249686
Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTT 7782
| ||||| | ||| || | || ||||||||
Sbjct 249687 CAAGATAGGCTTCAGCAGTCTCCTTCATTTT 249717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129695788440
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