Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq279 168 8e-37
seq326 129 7e-25
>seq279
Length=233879
Score = 168 bits (186), Expect = 8e-37
Identities = 632/966 (65%), Gaps = 24/966 (2%)
Strand=Plus/Minus
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||| | ||||||||| || ||||||| |||||||||| || | |||||| ||||| ||
Sbjct 179676 TGGTATGCTATTCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATGCTCTACAAGGAT 179617
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| || ||| | ||||| || |||||||| |||| || | || ||||| || ||
Sbjct 179616 GCTTGCAACAAGAAGAGCAACCAAAAGAACCTGGGGACTATTAGAAGCTCCAATCTATGC 179557
Query 112398 ACAGAAATCTTGGAATT-TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456
|| || ||| | |||| | | || ||||| ||||| |||||| | || || ||
Sbjct 179556 ACCGAGATCATCGAATACTGCTCACCT-GATGAAGTTGCTGTTTGTAACTTGGCTTCCAT 179498
Query 112457 CGCTCTCCCCAAGTATGTGGATCCAGAGACAA-AGACATTTGATTATGAAAAACTCCACG 112515
|| | || | | |||||| | | | ||| || ||||| || || |||||||
Sbjct 179497 TGCCTTACCTACCTTCGTGGATGCTGTGCGTGGAGA-ATATGATTTTGGCAAGCTCCACG 179439
Query 112516 AAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 112575
|||| || || ||| ||||| |||||| | || || |||| | || || |
Sbjct 179438 AAGTAACTCAAGTCGTCGTTCGCAACCTTAACAGAATCATCGACCGAAACTACTATCCAG 179379
Query 112576 TTGAGACTGCTCGTA--AATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGG 112633
| ||| || | | || | || | | || || ||||||| |||||| || ||
Sbjct 179378 TCGAGGAAGC-CAAACGAAGC-AACTTCCGCCATCGCCCAATTGCCTGCGGTGTTCAGGG 179321
Query 112634 TCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692
||| || |||| ||| | ||||| || | ||||||||||| ||||| ||| |
Sbjct 179320 TCTTGCTGATGCTTTCCTCGCTTTG-CGACTTCCATTTGATTCCCCTGAAGCCAAGCAGT 179262
Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA-GGCGAGTTCGGAGTTG 112751
| ||| | || ||||| ||||| || |||||| | |||| ||| | ||| |
Sbjct 179261 TGAATATTCAAATTTTTGAAACAATTTACCACGCCTGT-TTGACTGCGTCCTGTGAGCTA 179203
Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 112811
|| ||||||| || |||||| | | ||| |||||||||| ||||| || | |||
Sbjct 179202 GCTAAGGTTGACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACAGGGCATCCTT 179143
Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGACGCTCTCAAGGA 112870
|| | ||||||||||| || | || | | || || || ||||| |||| || |
Sbjct 179142 CAGTATGATATGTGGG-GTGTCACTCCCACCGATCTCTGGGATTGGGATTCTCTGAAACA 179084
Query 112871 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 112930
||| || | || |||| |||||| | | | || || ||||| || |||
Sbjct 179083 GGAGATCGCTAAGCATGGAGTTCGCAACAGTTTGCTTGTTGCTCCCATGCCTACTGCCAG 179024
Query 112931 CAC-CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 112989
||| || | |||||| | || |||||||| ||||| ||||| | || |||||
Sbjct 179023 CACTAGCCAGATTCTTGGAT-TCAACGAATGCTTCGAACCTTACACCTCTAATATCTACT 178965
Query 112990 TGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCA 113049
| | | ||| || || ||||| ||||||||| | || || | |||||
Sbjct 178964 CGCGCCGTGTCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCTTTTGAAGGACCTGG 178905
Query 113050 AAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 113109
|| | |||||||||||| | | |||||| ||| || | || || || ||||
Sbjct 178904 TGGACTTGGGTCTCTGGTCCGACAACATGAAGAATCGAATTATTGCAGATGGAGGCTCCA 178845
Query 113110 TTCAAAATATTGTGGATATTCCAGATGAAAT-TAAGAAGTTGTACCGCACAGTTTGGGAA 113168
| ||||| ||| |||| ||| | || || ||| | || ||| || || ||||||
Sbjct 178844 TCCAAAACATTCCCAATATCCCACAGGATATCAAAGCACTT-TACAAAACCGTCTGGGAA 178786
Query 113169 ATC---AAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAA 113225
||| || ||| | | || | ||||| || ||||| ||| |||||| || |||
Sbjct 178785 ATCTCTCAG-CGAACCA--TTGTTCAGATGGCTGCCGATCGAGGTGCCTTCATCGACCAA 178729
Query 113226 AGTCAA 113231
||||
Sbjct 178728 TCTCAA 178723
>seq326
Length=563541
Score = 129 bits (142), Expect = 7e-25
Identities = 156/207 (75%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 102167
||||||| || || | || || || ||||||||||| ||| | || ||||||
Sbjct 320308 CAGTTCCTTGCATCCGGAAAAAGGCTGATTGGGCTATCCGCTGGATCGAAGACAAAGAGT 320249
Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227
| | ||||||| |||| ||| |||| ||||| ||| || |||||||||||| |||
Sbjct 320248 C-TACCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGA 320190
Query 102228 TCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286
||||| |||| | || | ||||| |||||||| || || |||||||| || ||| ||
Sbjct 320189 TCCTT-TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTC 320131
Query 102287 CAACGAGCTTATCTCTCGTGACGAGGG 102313
||| ||||||||||||||||| |||||
Sbjct 320130 CAATGAGCTTATCTCTCGTGATGAGGG 320104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620739366121520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |