Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq279 138 1e-27
seq326 111 2e-19
seq90 93.3 5e-14
>seq279
Length=233879
Score = 138 bits (152), Expect = 1e-27
Identities = 583/904 (64%), Gaps = 20/904 (2%)
Strand=Plus/Plus
Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810
||||||||| || || ||| || |||||||| | |||||||| | || |||||
Sbjct 178783 GATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTTTTG 178842
Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870
|| || || || | | || ||| |||||| | | |||||| ||||| | |
Sbjct 178843 GATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAAGTC 178902
Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930
| || || || | || | ||||||||| ||||| || || ||| | |
Sbjct 178903 CACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACGGCG 178962
Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG-G 105989
| ||||| || | ||||| ||||| |||||||| || | |||||| | || |
Sbjct 178963 CGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGCTAG 179021
Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGC 106049
|| ||| || ||||| || || | | | |||||| |||| || | | |||
Sbjct 179022 TGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATGCTTAGCGATCT 179081
Query 106050 GTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAA 106107
| || ||| |||||| || || || | | || | || ||||||||||| |
Sbjct 179082 CCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCACATATCATA 179139
Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167
||||| | || || || |||||||| ||| ||| ||| | || | | |
Sbjct 179140 CTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCGTCAACCTT 179199
Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227
||| | |||||| ||| || | ||||| || || |||||||| || || |||
Sbjct 179200 AGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATTTGAATATT 179259
Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGA 106286
|| || |||||||||| |||||||||| | || ||| | | || |||| || |
Sbjct 179260 CAACTGCTTGGCTTCAGGGGAATCAAATG-GAAGTCGCAAAGCGAGGAAAGCATCAGCAA 179318
Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCA 106345
|||| |||||||| | |||| || | || || | || | || | || |||
Sbjct 179319 GACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCG 179377
Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTG 106402
|| ||||| | |||| ||| |||| || ||| || || | ||| | ||| ||
Sbjct 179378 ACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTT---GCGAACGACGACTTGAGTT 179434
Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462
| ||| || || || || ||||| | | | | | ||| || | | || | |
Sbjct 179435 ACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGTAGGTAAG 179494
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC--TTATCTGTGTACTCTAAAATTT 106520
|| || || ||||| || |||||||| ||||| | | | || | || | || |
Sbjct 179495 GCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCGATGATCT 179552
Query 106521 CTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGC 106580
| || || | ||||| || |||| ||||||| ||||||||||| ||||| |||||||
Sbjct 179553 CGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGC 179612
Query 106581 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCT 106640
| ||||||||||||||||| |||| | || ||||| || || | || |||||| || |
Sbjct 179613 AAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGAATAGCAT 179672
Query 106641 TCCA 106644
|||
Sbjct 179673 ACCA 179676
Score = 131 bits (144), Expect = 2e-25
Identities = 374/572 (65%), Gaps = 11/572 (2%)
Strand=Plus/Plus
Query 106739 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 106798
|||||||| | | ||||||||| |||| ||||| |||| || |||||| || |||||
Sbjct 179831 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 179890
Query 106799 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858
|| || || || |||| || | || ||||| | | ||| | ||||| | ||
Sbjct 179891 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 179950
Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918
||||| || | || | ||| || | |||||| |||||||||||||| ||||
Sbjct 179951 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 180010
Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972
|| | | ||| | | ||| || | || | || || | || ||| ||
Sbjct 180011 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 180067
Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 107032
|| ||||| ||||| |||| ||| || | ||| ||||| || || ||| ||
Sbjct 180068 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 180127
Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092
| | | | | || |||| | |||||||| || || |||||| ||| |
Sbjct 180128 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 180187
Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152
||||| | || || |||| || || | ||| ||| ||||| | | || |||
Sbjct 180188 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 180247
Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212
||||| || |||||| || || |||||||| ||||||||||| || | || |||
Sbjct 180248 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 180307
Query 107213 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271
|||| ||| ||| ||||| || |||||||| | ||| || | ||| || ||
Sbjct 180308 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 180366
Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303
|||||| || || || |||||||||| |||||
Sbjct 180367 GTGGATCCCAATAGCAACACGCATAATCATGT 180398
>seq326
Length=563541
Score = 111 bits (122), Expect = 2e-19
Identities = 303/457 (66%), Gaps = 18/457 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCA-TCAAGGCTA-ATGTTTTCCA 117043
||||| ||||| ||||||||||||||||| ||||| ||| ||| || | ||||| ||||
Sbjct 319798 TAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCA--GCGAGATGTTGTCCA 319855
Query 117044 TAAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGA 117097
| || || ||||| || | | ||| | | | || | | |||| ||
Sbjct 319856 TGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAAC------GA 319909
Query 117098 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 117157
|||| ||||| | ||| |||| ||||| | | |||| || | |||||| |||| |
Sbjct 319910 GGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAA 319969
Query 117158 GATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217
| |||||||| || || || |||| | | ||| || | || || ||| | | ||
Sbjct 319970 GTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGA 320029
Query 117218 TGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
| || | || || | |||| | | |||| |||||| ||| |
Sbjct 320030 TTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGAGAAGGCAGGCGA 320089
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| | ||||||||| || || ||||| ||||| || ||| ||||||||||
Sbjct 320090 AGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTGGCA 320149
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396
| || || |||||||||| ||| | || | |||| || || || ||||||||||||
Sbjct 320150 TAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA-AAGGATCCACTGAAGAAGATACCT 320208
Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
|| ||| ||||| || | || |||| || ||||
Sbjct 320209 TCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGG 320245
>seq90
Length=319458
Score = 93.3 bits (102), Expect = 5e-14
Identities = 91/115 (79%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420
|||||| | |||||||||||||||||||| | |||||| ||| || ||||| ||||||
Sbjct 219237 CTTTCCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGG 219179
Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475
|| |||| ||||| || || | || ||| || |||||||||||||| || ||
Sbjct 219178 TTGCAAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAA 219124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977916468840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |