Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq279 138 1e-27 seq326 111 2e-19 seq90 93.3 5e-14 >seq279 Length=233879 Score = 138 bits (152), Expect = 1e-27 Identities = 583/904 (64%), Gaps = 20/904 (2%) Strand=Plus/Plus Query 105751 GATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG 105810 ||||||||| || || ||| || |||||||| | |||||||| | || ||||| Sbjct 178783 GATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTTTTG 178842 Query 105811 AATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTT 105870 || || || || | | || ||| |||||| | | |||||| ||||| | | Sbjct 178843 GATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAAGTC 178902 Query 105871 CTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCT 105930 | || || || | || | ||||||||| ||||| || || ||| | | Sbjct 178903 CACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACGGCG 178962 Query 105931 CAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCG-G 105989 | ||||| || | ||||| ||||| |||||||| || | |||||| | || | Sbjct 178963 CGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGCTAG 179021 Query 105990 TGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGC 106049 || ||| || ||||| || || | | | |||||| |||| || | | ||| Sbjct 179022 TGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATGCTTAGCGATCT 179081 Query 106050 GTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAA 106107 | || ||| |||||| || || || | | || | || ||||||||||| | Sbjct 179082 CCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACAC-CCCACATATCATA 179139 Query 106108 TTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC 106167 ||||| | || || || |||||||| ||| ||| ||| | || | | | Sbjct 179140 CTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCGTCAACCTT 179199 Query 106168 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 106227 ||| | |||||| ||| || | ||||| || || |||||||| || || ||| Sbjct 179200 AGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATTTGAATATT 179259 Query 106228 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGA 106286 || || |||||||||| |||||||||| | || ||| | | || |||| || | Sbjct 179260 CAACTGCTTGGCTTCAGGGGAATCAAATG-GAAGTCGCAAAGCGAGGAAAGCATCAGCAA 179318 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCA 106345 |||| |||||||| | |||| || | || || | || | || | || ||| Sbjct 179319 GACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTTGCTTCGTTTG-GCTTCCTCG 179377 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTG 106402 || ||||| | |||| ||| |||| || ||| || || | ||| | ||| || Sbjct 179378 ACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTT---GCGAACGACGACTTGAGTT 179434 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | ||| || || || || ||||| | | | | | ||| || | | || | | Sbjct 179435 ACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGGTAGGTAAG 179494 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC--TTATCTGTGTACTCTAAAATTT 106520 || || || ||||| || |||||||| ||||| | | | || | || | || | Sbjct 179495 GCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCAGTAT--TCGATGATCT 179552 Query 106521 CTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGC 106580 | || || | ||||| || |||| ||||||| ||||||||||| ||||| ||||||| Sbjct 179553 CGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTTCTTGTTGC 179612 Query 106581 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCT 106640 | ||||||||||||||||| |||| | || ||||| || || | || |||||| || | Sbjct 179613 AAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAGAATAGCAT 179672 Query 106641 TCCA 106644 ||| Sbjct 179673 ACCA 179676 Score = 131 bits (144), Expect = 2e-25 Identities = 374/572 (65%), Gaps = 11/572 (2%) Strand=Plus/Plus Query 106739 CCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 106798 |||||||| | | ||||||||| |||| ||||| |||| || |||||| || ||||| Sbjct 179831 CCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCATTCTTCTCAACGCGTTTCATA 179890 Query 106799 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858 || || || || |||| || | || ||||| | | ||| | ||||| | || Sbjct 179891 AATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGAGCACGAACTTCTTCCTTGCCG 179950 Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918 ||||| || | || | ||| || | |||||| |||||||||||||| |||| Sbjct 179951 TGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGCTCAAGGTAGATG 180010 Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 || | | ||| | | ||| || | || | || || | || ||| || Sbjct 180011 GCAAACGCTCC---TGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCAGTGTTATTG 180067 Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT 107032 || ||||| ||||| |||| ||| || | ||| ||||| || || ||| || Sbjct 180068 AAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCAATGTAGGAA 180127 Query 107033 TTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGC 107092 | | | | | || |||| | |||||||| || || |||||| ||| | Sbjct 180128 CCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTTGAAATTAGA 180187 Query 107093 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 107152 ||||| | || || |||| || || | ||| ||| ||||| | | || ||| Sbjct 180188 GCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGG 180247 Query 107153 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 107212 ||||| || |||||| || || |||||||| ||||||||||| || | || ||| Sbjct 180248 AAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGA 180307 Query 107213 ATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCC 107271 |||| ||| ||| ||||| || |||||||| | ||| || | ||| || || Sbjct 180308 GTGAA-GTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCC 180366 Query 107272 GTGGATGCCGATGGCCACACGCATAAACATGT 107303 |||||| || || || |||||||||| ||||| Sbjct 180367 GTGGATCCCAATAGCAACACGCATAATCATGT 180398 >seq326 Length=563541 Score = 111 bits (122), Expect = 2e-19 Identities = 303/457 (66%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCA-TCAAGGCTA-ATGTTTTCCA 117043 ||||| ||||| ||||||||||||||||| ||||| ||| ||| || | ||||| |||| Sbjct 319798 TAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCA--GCGAGATGTTGTCCA 319855 Query 117044 TAAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGA 117097 | || || ||||| || | | ||| | | | || | | |||| || Sbjct 319856 TGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAAC------GA 319909 Query 117098 GGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGA 117157 |||| ||||| | ||| |||| ||||| | | |||| || | |||||| |||| | Sbjct 319910 GGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAA 319969 Query 117158 GATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGA 117217 | |||||||| || || || |||| | | ||| || | || || ||| | | || Sbjct 319970 GTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGA 320029 Query 117218 TGGCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAA 117277 | || | || || | |||| | | |||| |||||| ||| | Sbjct 320030 TTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAGAGAAGAGAAGGCAGGCGA 320089 Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337 | || ||| | ||||||||| || || ||||| ||||| || ||| |||||||||| Sbjct 320090 AGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTGGCA 320149 Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCC 117396 | || || |||||||||| ||| | || | |||| || || || |||||||||||| Sbjct 320150 TAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA-AAGGATCCACTGAAGAAGATACCT 320208 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || ||| ||||| || | || |||| || |||| Sbjct 320209 TCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGG 320245 >seq90 Length=319458 Score = 93.3 bits (102), Expect = 5e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGT-TGATTTTCGCGGGCGA 9420 |||||| | |||||||||||||||||||| | |||||| ||| || ||||| |||||| Sbjct 219237 CTTTCCAATAGCATCAATCTCATCAATGAATATAATACAAGGTGTGTTTTTC-CGGGCGG 219179 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 || |||| ||||| || || | || ||| || |||||||||||||| || || Sbjct 219178 TTGCAAACAGATCACGGACTCGGGAGGGGCCAACGCCAACAAACATCTCGACGAA 219124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977916468840