Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq246 98.7 6e-16 >seq246 Length=239075 Score = 98.7 bits (108), Expect = 6e-16 Identities = 136/190 (72%), Gaps = 8/190 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || || |||||||||||||| || |||||| | || | || || Sbjct 189972 AACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTC 190031 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || ||||| || || || ||||||||||| | || | ||| |||||||| Sbjct 190032 CAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTG 190091 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||| || ||||| |||||||| ||| | | |||||| |||| |||||| | Sbjct 190092 AATTTTGGACTTGAC----ACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAG 190147 Query 34948 TTTTTCCCGT 34957 | ||||| || Sbjct 190148 TCTTTCCGGT 190157 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||| ||| |||| |||| || | ||||| || ||||| || || ||||||||| Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || |||||||| || ||||| ||||| |||||||| || | || Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || ||||| || || || ||| || || |||| || || | ||| Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAAC--AT--TATCAATGGTATCGGAGCTCTC 189366 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || | || || ||||| || || || || || || ||||| ||||| Sbjct 189367 AACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/222 (68%), Gaps = 10/222 (5%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | || | | ||||||||||| ||| || |||||||| || || || | Sbjct 189645 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 189704 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||||| | || | || |||||||| || ||||| || ||||| || ||||||||| | | Sbjct 189705 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 189764 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGC 34927 | | || || || || || ||| || ||| |||| ||||| | | Sbjct 189765 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT-----GA 189819 Query 34928 CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||| || || | ||| ||||| || || |||||||| || || Sbjct 189820 CTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632053019448