Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq279 143 3e-29
seq326 96.9 4e-15
>seq279
Length=233879
Score = 143 bits (158), Expect = 3e-29
Identities = 361/549 (66%), Gaps = 0/549 (0%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| || ||||| ||||| |||| | || || || |||||| ||||| | || |
Sbjct 179800 CTCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGT 179859
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| || ||| || | || | ||||||||| ||| ||| ||||||| || | ||
Sbjct 179860 CCATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAA 179919
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
|| ||| | || | | |||||| ||||| || | || || | || || |
Sbjct 179920 TAGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAA 179979
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
||||| ||||||||| || | || || || | | ||||| || || ||||||||
Sbjct 179980 AATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCC 180039
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
|| || | ||||||||||| || || |||| | | ||| || ||||| || |||||
Sbjct 180040 CTGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGA 180099
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACC 48484
||||| ||||| | ||| || ||| || | | || ||| || |||
Sbjct 180100 AGAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACC 180159
Query 48485 TATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTC 48544
|||||||| || | || || ||||||||||| ||| ||||| |||||||| || ||
Sbjct 180160 AATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTC 180219
Query 48545 TATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCC 48604
|| || || || |||||| | || || || | ||| || || || ||| ||
Sbjct 180220 GATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACC 180279
Query 48605 TGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGT 48664
| || || | || ||||| |||||| | || | || | || | | ||||||||
Sbjct 180280 AGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGT 180339
Query 48665 TTCAATAAC 48673
||||| ||
Sbjct 180340 CTCAATGAC 180348
>seq326
Length=563541
Score = 96.9 bits (106), Expect = 4e-15
Identities = 177/259 (68%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318
|||| || || || ||||| || ||||| || ||||| || |||| || || | |
Sbjct 320436 TTTCGGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGA 320495
Query 19319 TCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTG 19378
||| ||||| | | || | ||||| | || ||||| || |||||||| || |
Sbjct 320496 CCTGGACTTCTCCGCTGAAACGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGG 320555
Query 19379 CAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATT---CC 19435
| || ||||| || || ||| || || | | || || | ||| |||| ||
Sbjct 320556 CGAAGAATGCCAAGACGTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCC 320615
Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495
| |||| || |||||| || | ||| |||||||| | |||||||| || ||||||||||
Sbjct 320616 AGTCATGAAGATCTTTCGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTT 320675
Query 19496 TTTTATACATGTTCCATAT 19514
| || ||||| | ||| ||
Sbjct 320676 TCTTGTACATTTGCCAGAT 320694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562106052693240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |