Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq246 129 5e-25
>seq246
Length=239075
Score = 129 bits (142), Expect = 5e-25
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| || || || ||||| ||||| ||||| | || ||| | |||| || | |||
Sbjct 189442 ATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCCTCAAGTTG 189501
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || || || || | ||||| |||||||| || |||||||||||||||||||||||
Sbjct 189502 TTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCTTGAATTTT 189561
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||| ||| | || | || || || | || |||||||| |||| || || |||||
Sbjct 189562 TGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGT 189621
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || || |||||
Sbjct 189622 CAGGGTTTTAACGAAGATTTGCAT 189645
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338
|| || || |||||||| || | | ||| | |||| || | || ||||| |||||
Sbjct 189227 TCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAG 189286
Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398
|| | ||| || ||||| || || || ||||| |||||||| ||||| ||| ||| |
Sbjct 189287 ATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGGATTTTAGATTTAACATTA 189346
Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458
|| | || || || | || |||||||| || | ||||||||||| | ||||| ||
Sbjct 189347 TCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACG 189406
Query 101459 AATATCTGCATG 101470
|| || ||||||
Sbjct 189407 AAGATTTGCATG 189418
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
||||||| | | ||| | ||| || ||||| || || || || || ||||||||||| |
Sbjct 189645 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 189704
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | | || |||| ||||| || || || || | ||||| || || || |
Sbjct 189705 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 189764
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
||||||||||||||||||| ||||| || || | || | || || || | ||||
Sbjct 189765 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCA 189824
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457
| || || |||| || || ||||| | |||||| ||
Sbjct 189825 CCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396276511609587
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |