Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq326 158 2e-33
seq279 123 5e-23
>seq326
Length=563541
Score = 158 bits (174), Expect = 2e-33
Identities = 348/517 (67%), Gaps = 11/517 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | |||||||||||||| ||||| || || ||||||||| ||
Sbjct 319794 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCAGCGAGATGTTGTC 319853
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
|||||| ||| ||||||| | ||| || || | ||||| | || ||
Sbjct 319854 CATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAACGAGGAG 319913
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG-GG 48017
|||| || || |||||||||||| ||||||| || |||||| || | || |
Sbjct 319914 TCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAAGTGC 319973
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|| ||| | ||| | |||||| ||||||| ||| || || ||||| | || |
Sbjct 319974 GCATGGG-AGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGATTT 320032
Query 48078 GCTTAACGCGGGACTCTG---AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134
|| ||| | ||||| ||| || ||||||||| | |||| | |||||
Sbjct 320033 TCTGAAC---AGCCTCTGGGCTGGGGCGGTGGCGCAGGTG---AGAGAAGAGAAGGCAGG 320086
Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194
| ||||| |||| || || || || || ||| ||| | ||||| ||| || || |
Sbjct 320087 CGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTG 320146
Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254
|||| | || | || || |||||||| |||| ||| || || ||| ||||||||| |
Sbjct 320147 GCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGAAGAAGATAC 320206
Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314
| || || || || || ||| ||| | || | | || | || | |||||| |||||
Sbjct 320207 CTTCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGGTAGACTCTTTGTCTTCGATCC 320266
Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
|| | ||||| || ||||| ||| |||||| ||
Sbjct 320267 AGCGGATAGCCCAATCAGCCTTTTTCCGGATGCAAGG 320303
Score = 89.7 bits (98), Expect = 1e-12
Identities = 169/248 (68%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| ||||| | || || || ||||||||| ||||||||| | ||||||| |||
Sbjct 320438 TCGGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACC 320497
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
|| |||||| | ||| | ||| | || ||||||||||| || ||||| || || ||
Sbjct 320498 TGGACTTCTCCGCTGAAACGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGGCG 320557
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAG 48607
||||| || | ||| ||| | ||| | ||||||| | | | | ||||||
Sbjct 320558 AAGAATGCCAAGACGTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCCAG 320617
Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667
| || | ||||| || || |||||||| | ||||| || || || ||||||
Sbjct 320618 TCATGAAGATCTTTCGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTC 320677
Query 48668 TTGTACAT 48675
||||||||
Sbjct 320678 TTGTACAT 320685
>seq279
Length=233879
Score = 123 bits (136), Expect = 5e-23
Identities = 574/898 (64%), Gaps = 35/898 (4%)
Strand=Plus/Plus
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
|| ||| |||| ||||| ||||| ||| | | | |||||| |||| ||||| |||
Sbjct 178774 TCGCTGAGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGG 178833
Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872
||||| || | || || | | | || | | | | ||||| ||| |||
Sbjct 178834 AATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGATTCTT---CATGTTGTCGGACCA 178890
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
||| ||| | | ||||| ||| | || |||||||| || ||||| || ||||
Sbjct 178891 GAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGC 178950
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
|| || | | | ||| | || || ||||| || |||| || |||||| || ||
Sbjct 178951 AAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGAATCCAAG 179010
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052
|||||| ||||||||| || ||||||||||| || || | |||||| | ||||| ||
Sbjct 179011 AATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATG 179070
Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112
|| |||| | || | | | ||||| | |||| || || | |
Sbjct 179071 CTTAGCGAT----CTCC--TGTTTCAGAGAATCCCA-ATCCCAG--AGATCGGTGGGAGT 179121
Query 213113 CACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGA 213172
|| |||||| ||| |||| | |||||| | || || || | || |||||
Sbjct 179122 GACACCCCACATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGA 179181
Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232
|| ||||| | |||| || ||||| |||||||| || |||| ||| || ||
Sbjct 179182 ATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGT 179241
Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA-TCATCATGC 213291
|||||| || | | || | || |||||| || ||||| || || | || | ||
Sbjct 179242 TTCAAAAATTTGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCGCAAAGC 179301
Query 213292 GTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351
| |||| ||||||| || ||||| || ||| | | || || | || | | |||
Sbjct 179302 G-AGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTT-- 179358
Query 213352 ACTTGG--AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409
||| | | ||||| | || || |||| | ||||||||| |||| ||||||||
Sbjct 179359 GCTTCGTTTGGCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCG 179418
Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGT------ACTCGTGATTGAACACGTAGCCCCC 213463
| | |||| || || | | || | | || | ||| |||| | |
Sbjct 179419 AACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCAT-ATTCTCCACG-----CAC 179472
Query 213464 GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523
| | ||| || ||| | ||| ||| |||| ||| ||||| || || || | ||
Sbjct 179473 AGCATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAG- 179531
Query 213524 GTCTG-TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCT 213582
|| | ||| || |||||||||||||| || ||| || || || || ||||||||||
Sbjct 179532 GTGAGCAGTATTCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCT 179591
Query 213583 GGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640
||||| ||| |||| || ||||||||||||||| ||||| || |||||
Sbjct 179592 TTTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTC 179649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931528247133440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |