Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq326 158 2e-33 seq279 123 5e-23 >seq326 Length=563541 Score = 158 bits (174), Expect = 2e-33 Identities = 348/517 (67%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || || ||||||||| || Sbjct 319794 CTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCAGCGAGATGTTGTC 319853 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 |||||| ||| ||||||| | ||| || || | ||||| | || || Sbjct 319854 CATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAGAGCAACGAGGAG 319913 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG-GG 48017 |||| || || |||||||||||| ||||||| || |||||| || | || | Sbjct 319914 TCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCATTCCGAGAAGTGC 319973 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 || ||| | ||| | |||||| ||||||| ||| || || ||||| | || | Sbjct 319974 GCATGGG-AGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTTCTGTGATGATTT 320032 Query 48078 GCTTAACGCGGGACTCTG---AGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || ||| | ||||| ||| || ||||||||| | |||| | ||||| Sbjct 320033 TCTGAAC---AGCCTCTGGGCTGGGGCGGTGGCGCAGGTG---AGAGAAGAGAAGGCAGG 320086 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| || || || || || ||| ||| | ||||| ||| || || | Sbjct 320087 CGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGGAAAAGGTAAGGCCTG 320146 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || |||||||| |||| ||| || || ||| ||||||||| | Sbjct 320147 GCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATCCACTGAAGAAGATAC 320206 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 | || || || || || ||| ||| | || | | || | || | |||||| ||||| Sbjct 320207 CTTCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAAGGTAGACTCTTTGTCTTCGATCC 320266 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || | ||||| || ||||| ||| |||||| || Sbjct 320267 AGCGGATAGCCCAATCAGCCTTTTTCCGGATGCAAGG 320303 Score = 89.7 bits (98), Expect = 1e-12 Identities = 169/248 (68%), Gaps = 3/248 (1%) Strand=Plus/Plus Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | || || || ||||||||| ||||||||| | ||||||| ||| Sbjct 320438 TCGGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACC 320497 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || |||||| | ||| | ||| | || ||||||||||| || ||||| || || || Sbjct 320498 TGGACTTCTCCGCTGAAACGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGGCG 320557 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAG 48607 ||||| || | ||| ||| | ||| | ||||||| | | | | |||||| Sbjct 320558 AAGAATGCCAAGACGTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCCAG 320617 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 | || | ||||| || || |||||||| | ||||| || || || |||||| Sbjct 320618 TCATGAAGATCTTTCGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTC 320677 Query 48668 TTGTACAT 48675 |||||||| Sbjct 320678 TTGTACAT 320685 >seq279 Length=233879 Score = 123 bits (136), Expect = 5e-23 Identities = 574/898 (64%), Gaps = 35/898 (4%) Strand=Plus/Plus Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 || ||| |||| ||||| ||||| ||| | | | |||||| |||| ||||| ||| Sbjct 178774 TCGCTGAGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGG 178833 Query 212816 GATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 ||||| || | || || | | | || | | | | ||||| ||| ||| Sbjct 178834 AATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGATTCTT---CATGTTGTCGGACCA 178890 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 ||| ||| | | ||||| ||| | || |||||||| || ||||| || |||| Sbjct 178891 GAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGC 178950 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 || || | | | ||| | || || ||||| || |||| || |||||| || || Sbjct 178951 AAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGAATCCAAG 179010 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 |||||| ||||||||| || ||||||||||| || || | |||||| | ||||| || Sbjct 179011 AATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATG 179070 Query 213053 CTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTT 213112 || |||| | || | | | ||||| | |||| || || | | Sbjct 179071 CTTAGCGAT----CTCC--TGTTTCAGAGAATCCCA-ATCCCAG--AGATCGGTGGGAGT 179121 Query 213113 CACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGA 213172 || |||||| ||| |||| | |||||| | || || || | || ||||| Sbjct 179122 GACACCCCACATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGA 179181 Query 213173 GTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGT 213232 || ||||| | |||| || ||||| |||||||| || |||| ||| || || Sbjct 179182 ATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGT 179241 Query 213233 TTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA-TCATCATGC 213291 |||||| || | | || | || |||||| || ||||| || || | || | || Sbjct 179242 TTCAAAAATTTGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCGCAAAGC 179301 Query 213292 GTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG 213351 | |||| ||||||| || ||||| || ||| | | || || | || | | ||| Sbjct 179302 G-AGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTT-- 179358 Query 213352 ACTTGG--AGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 ||| | | ||||| | || || |||| | ||||||||| |||| |||||||| Sbjct 179359 GCTTCGTTTGGCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCG 179418 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGT------ACTCGTGATTGAACACGTAGCCCCC 213463 | | |||| || || | | || | | || | ||| |||| | | Sbjct 179419 AACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCAT-ATTCTCCACG-----CAC 179472 Query 213464 GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGA 213523 | | ||| || ||| | ||| ||| |||| ||| ||||| || || || | || Sbjct 179473 AGCATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAG- 179531 Query 213524 GTCTG-TGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCT 213582 || | ||| || |||||||||||||| || ||| || || || || |||||||||| Sbjct 179532 GTGAGCAGTATTCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCT 179591 Query 213583 GGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 ||||| ||| |||| || ||||||||||||||| ||||| || ||||| Sbjct 179592 TTTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTC 179649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528247133440