Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq326 149 1e-30
>seq326
Length=563541
Score = 149 bits (164), Expect = 1e-30
Identities = 318/478 (67%), Gaps = 7/478 (1%)
Strand=Plus/Minus
Query 25846 TGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGA 25904
|||||| | || || || | |||| |||| |||| || || |||||||||||||| ||
Sbjct 320267 TGGATCGA-AGACAAAGAGTCTACCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGA 320209
Query 25905 GGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCAT 25964
|| ||||| ||||| || || |||||| | ||||||||||| ||| || || ||
Sbjct 320208 AGGTATCTTCTTCAGTGGATCCTTTGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTAT 320149
Query 25965 GCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTT 26024
||| || || ||||||||| ||||| ||| | || |||||| | |||| || ||
Sbjct 320148 GCCAGGCCTTACCTTTTCCAATGAGCTTATCTCTCGTGATGAGGGTTTACACACTGACTT 320089
Query 26025 TGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAG 26084
|||||||| |||| | | ||| ||| |||| || | |||| | || | |
Sbjct 320088 CGCCTGCCTTCTCTTCTC---TCACCTGCGCCACCGCCCCAGCCCAGAGGCTGTTCAGAA 320032
Query 26085 TATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNN 26144
||||||| ||| ||||| | |||||| ||||||| |
Sbjct 320031 AATCATCACAGAAGCTGTCGCCATCGAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGC 319972
Query 26145 NNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCT 26204
| || |||||| || |||||| |||||||||| |||| ||| || || | ||
Sbjct 319971 ACTTCTCGGAATGAACGCCAAGCTCATGTGCCAATACATCGAGTTTGTTGCTGATCGACT 319912
Query 26205 GCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGG 26263
|| || | ||||| | | |||||| | | ||||| ||||| || ||||
Sbjct 319911 CCTCGTTGC-TCTGGGCAATAAGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGG 319853
Query 26264 AAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
| ||||| ||| || || ||||| ||||||||||| ||| | || || ||||| ||
Sbjct 319852 ACAACATCTCGCTGACTGGAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTACCA 319795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928840260271040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |