Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 2e-21
seq246 111 1e-18
seq190 91.5 1e-12
>seq4
Length=94551
Score = 120 bits (132), Expect = 2e-21
Identities = 322/488 (66%), Gaps = 6/488 (1%)
Strand=Plus/Minus
Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451
||||| |||||||| ||||| ||||| | || ||||| || | ||| | || || ||
Sbjct 75461 GAAATCATTGCCAACGACCAGGGTAACCGGACCACACCCTCGTTCGTTGCCTTCACAGAC 75402
Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511
|| || | ||| || || ||||| || ||| |||||| || || || || ||
Sbjct 75401 ACCGAGCGTCTGATCGGGGATGCCGCCAAAAATCAAGTCGCCATGAACCCCTCCAACACA 75342
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
| ||||| || || | | ||||| || || || | ||| | |||||||| ||
Sbjct 75341 GTCTTTGACGCCAAGCGTCTCATTGGCCGCAAATTCGCCGATCCTGAGGTCCAATCCGAC 75282
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629
||| || | || || ||||| || | | || || ||| || | |
Sbjct 75281 ATGAAGCACTTCCCCTTCAAGGTCATTGACAAGGCGGGAAAGCCAGTCATCTCCGTTGAG 75222
Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689
| || | || ||| || || || | ||||| |||| || || ||||| | | |
Sbjct 75221 TTCAAG--GGCGAAGAGAAGCAGTTCACCCCGGAGGAAATCTCCTCCATGGTCCTGACGA 75164
Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748
| |||| | |||| || ||| || || |||||| ||| | | || || |||||
Sbjct 75163 AGATGAGAGAAACTGCCGAG-TCCTACCTTGGAGGCACAGTTAACAACGCCGTCGTTACT 75105
Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808
|| || || ||||| || ||||| || |||||||| || || ||||| || || ||
Sbjct 75104 GTCCCCGCCTATTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTCTCATCGCT 75045
Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868
|| || ||||| | || ||||| || ||||| || || ||||| |||| |||||||||
Sbjct 75044 GGCCTGAATGTCCTTCGGATTATCAACGAACCCACTGCTGCCGCCATTGCCTATGGTCTT 74985
Query 474869 GATAAGAA 474876
|| |||||
Sbjct 74984 GACAAGAA 74977
>seq246
Length=239075
Score = 111 bits (122), Expect = 1e-18
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620
|| || ||||| || || || || || | ||| || || | ||||| | |||
Sbjct 189206 AGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCC 189265
Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680
|| || || || |||||||| || |||||||| ||||| || || || |||||||| |||
Sbjct 189266 TCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCT 189325
Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGT 480739
|| || || ||| ||| ||||| ||||| | | | | || || |||| ||||||||
Sbjct 189326 TGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTT-CAAGCGTAATAGT 189384
Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| ||||| || || |||||||| |||||
Sbjct 189385 TTTGCCGGTCAGGGTTTTAACGAAGATTTG 189414
>seq190
Length=258357
Score = 91.5 bits (100), Expect = 1e-12
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
|| || || || || || |||||||||||||||||||| || |||||||| || |||
Sbjct 249660 ACAGTCCCCGCCTACTTCAATGATTCTCAACGTCAAGCTACCAAAGATGCCGGTCAAATC 249601
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
|| ||||| || ||| | ||| || | ||||| || || || || || ||||| || |||
Sbjct 249600 GCCGGTCTCAACGTTCTCCGTGTTGTCAATGAGCCTACCGCTGCTGCTCTTGCCTACGGT 249541
Query 474866 CTTGA 474870
|| ||
Sbjct 249540 CTCGA 249536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268162428112868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |