Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq4 120 2e-21 seq246 111 1e-18 seq190 91.5 1e-12 >seq4 Length=94551 Score = 120 bits (132), Expect = 2e-21 Identities = 322/488 (66%), Gaps = 6/488 (1%) Strand=Plus/Minus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| |||||||| ||||| ||||| | || ||||| || | ||| | || || || Sbjct 75461 GAAATCATTGCCAACGACCAGGGTAACCGGACCACACCCTCGTTCGTTGCCTTCACAGAC 75402 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| || || ||||| || ||| |||||| || || || || || Sbjct 75401 ACCGAGCGTCTGATCGGGGATGCCGCCAAAAATCAAGTCGCCATGAACCCCTCCAACACA 75342 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | ||||| || || | | ||||| || || || | ||| | |||||||| || Sbjct 75341 GTCTTTGACGCCAAGCGTCTCATTGGCCGCAAATTCGCCGATCCTGAGGTCCAATCCGAC 75282 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| || | || || ||||| || | | || || ||| || | | Sbjct 75281 ATGAAGCACTTCCCCTTCAAGGTCATTGACAAGGCGGGAAAGCCAGTCATCTCCGTTGAG 75222 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || ||| || || || | ||||| |||| || || ||||| | | | Sbjct 75221 TTCAAG--GGCGAAGAGAAGCAGTTCACCCCGGAGGAAATCTCCTCCATGGTCCTGACGA 75164 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | |||| | |||| || ||| || || |||||| ||| | | || || ||||| Sbjct 75163 AGATGAGAGAAACTGCCGAG-TCCTACCTTGGAGGCACAGTTAACAACGCCGTCGTTACT 75105 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || || || ||||| || ||||| || |||||||| || || ||||| || || || Sbjct 75104 GTCCCCGCCTATTTCAACGATTCCCAGCGTCAAGCTACCAAGGATGCTGGTCTCATCGCT 75045 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 || || ||||| | || ||||| || ||||| || || ||||| |||| ||||||||| Sbjct 75044 GGCCTGAATGTCCTTCGGATTATCAACGAACCCACTGCTGCCGCCATTGCCTATGGTCTT 74985 Query 474869 GATAAGAA 474876 || ||||| Sbjct 74984 GACAAGAA 74977 >seq246 Length=239075 Score = 111 bits (122), Expect = 1e-18 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || || ||||| || || || || || | ||| || || | ||||| | ||| Sbjct 189206 AGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCC 189265 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || || || || |||||||| || |||||||| ||||| || || || |||||||| ||| Sbjct 189266 TCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCT 189325 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAATAGT 480739 || || || ||| ||| ||||| ||||| | | | | || || |||| |||||||| Sbjct 189326 TGGATTTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTT-CAAGCGTAATAGT 189384 Query 480740 TTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || || |||||||| ||||| Sbjct 189385 TTTGCCGGTCAGGGTTTTAACGAAGATTTG 189414 >seq190 Length=258357 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || || || || || |||||||||||||||||||| || |||||||| || ||| Sbjct 249660 ACAGTCCCCGCCTACTTCAATGATTCTCAACGTCAAGCTACCAAAGATGCCGGTCAAATC 249601 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||||| || ||| | ||| || | ||||| || || || || || ||||| || ||| Sbjct 249600 GCCGGTCTCAACGTTCTCCGTGTTGTCAATGAGCCTACCGCTGCTGCTCTTGCCTACGGT 249541 Query 474866 CTTGA 474870 || || Sbjct 249540 CTCGA 249536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268162428112868