Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq279 197 2e-45 seq90 116 4e-21 seq326 111 2e-19 >seq279 Length=233879 Score = 197 bits (218), Expect = 2e-45 Identities = 736/1128 (65%), Gaps = 32/1128 (3%) Strand=Plus/Minus Query 75830 TATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTAT 75888 |||||| |||| ||||||| ||| || | | || | | || | ||||| | ||||| Sbjct 179724 TATGAAAAGGAAGGTAGAGGCAAGAAAACCAT-CAAGGCCCAGAAGCTTTGGTATGCTAT 179666 Query 75889 TCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAA 75948 |||| | | || || |||||||| | || | |||||| |||||||||||||| ||||| Sbjct 179665 TCTCGAGGCTCAAACTGAGACTGGTAACCCCTTTATGCTCTACAAGGATGCTTGCAACAA 179606 Query 75949 GAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTT 76008 |||||| ||||||||||| |||| || || | ||||| ||||| ||||| || || | Sbjct 179605 GAAGAGCAACCAAAAGAACCTGGGGACTATTAGAAGCTCCAATCTATGCACCGAGATCAT 179546 Query 76009 AGAGTACACAGATAA--GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCA 76066 || | || | | | ||||| |||||||| || ||||| || || ||| | || Sbjct 179545 CGA--ATACTGCTCACCTGATGAAGTTGCTGTTTGTAACTTGGCTTCCATTGCCTTACCT 179488 Query 76067 AAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCAC-AAA 76125 | | || ||| | | | | | ||||| || || || || ||| | || || Sbjct 179487 ACCTTCGTGGATGCTGTGCGTGGAGAATATGATTTTGGCAAGCTCCACGAAGTAACTCAA 179428 Query 76126 G--ATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACT 76183 | | ||| | || || ||| || |||| ||| |||| | ||||| || ||| Sbjct 179427 GTCGTCGTTCGC---AACCTTAACAGAATCATCGACCGAAACTACTATCCAGTCGAGGAA 179371 Query 76184 GCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGA 76242 || | || | || | || || | || |||| | |||||||| ||||| || || Sbjct 179370 GC-CAAACGAAGCAACTTCCGCCATCGCCCAATTGCCTGCGGTGTTCAGGGTCTTGCTGA 179312 Query 76243 TGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTC 76301 || || | | ||| || | |||||||||| |||||||||| || ||||| || Sbjct 179311 TGCTTTCCTCGCTTTGCGACTTC-CATTTGATTCCCCTGAAGCCAAGCAGTTGAATATTC 179253 Query 76302 GTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCC 76361 || |||||||| || || ||||| | || ||| ||||| | ||| | | Sbjct 179252 AAATTTTTGAAACAATTTACCACGCCTGTTTGACTGCGTCCTGTGAGCTAGCTAAGGTTG 179193 Query 76362 AAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATA 76421 | || | ||| ||| ||| |||||||| | || || || | ||||||| ||||| Sbjct 179192 ACGGCCCATATTCCTCATATGAAGGTTCTCCAGTCTCACAGGGCATCCTTCAGTATGATA 179133 Query 76422 TGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAA 76479 |||||| || | || | | || || || |||||| ||| || | ||| Sbjct 179132 TGTGGG-GTGTCACTCCCACCGATC-TCTGGGATTGGGATTCTCTGAAACAGGAGATCGC 179075 Query 76480 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCAC-CGCAC 76538 || | || |||| |||||| | | | || || ||||| || ||| ||| || Sbjct 179074 TAAGCATGGAGTTCGCAACAGTTTGCTTGTTGCTCCCATGCCTACTGCCAGCACTAGCCA 179015 Query 76539 AAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAA 76598 | |||||| | || |||||||| ||||| ||||| | || |||||| | | | Sbjct 179014 GATTCTTGGAT-TCAACGAATGCTTCGAACCTTACACCTCTAATATCTACTCGCGCCGTG 178956 Query 76599 CCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTG 76658 ||| ||||| ||||| ||||||||| | || | || ||||| | | | | Sbjct 178955 TCCTTGCAGGCGAGTTCCAAATTGTCAACCCGTGGCTTTTGAAGGACCTGGTGGACTTGG 178896 Query 76659 GTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATA 76718 ||||||||||| | | |||||| ||| || | || || || ||||| ||||| | Sbjct 178895 GTCTCTGGTCCGACAACATGAAGAATCGAATTATTGCAGATGGAGGCTCCATCCAAAACA 178836 Query 76719 TCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATC---AAGA 76775 | | |||||||| | |||||||| || ||| || || ||||||||| || Sbjct 178835 TTCCCAATATCCCACAGGATATCAAAGCACTTTACAAAACCGTCTGGGAAATCTCTCAG- 178777 Query 76776 TGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTA 76835 ||| | | || | ||||| || ||||| ||| |||||| || ||| |||| | Sbjct 178776 CGAACCA--TTGTTCAGATGGCTGCCGATCGAGGTGCCTTCATCGACCAATCTCAATCTC 178719 Query 76836 TGAATCTATTCA-TGGAAAG-TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGC 76893 | || |||||| | ||| | || || ||| ||| | | ||||| | || Sbjct 178718 TCAA--TATTCACTTGAAGGAGCCCACCATGGGTAAGATTACCAGCATGCACTTCACCGG 178661 Query 76894 GTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 ||||||| || | || || || ||||| |||||||| ||| ||| Sbjct 178660 CTGGAAACTCGGCTTGAAGACTGGCATGTATTATCTCCGTACAATGGC 178613 Score = 123 bits (136), Expect = 3e-23 Identities = 377/580 (65%), Gaps = 11/580 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| | ||||| || || || || |||||||| || ||| | || || Sbjct 180406 CCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGT 180347 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329 | | |||||||| || ||||| ||| ||| |||| ||| || | || ||||||| Sbjct 180346 CATTGAGACATATAACCTCATGTCGCAAAAGTAC-TTCACTCATGCCTCTCCTACCCTCT 180288 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || || |||||| || |||||||| || | | ||||| | Sbjct 180287 TCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAG 180228 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| | || || |||| || || | ||||| | ||| |||||| || | Sbjct 180227 ACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCG 180168 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| | |||| || | | | | | || ||| || || | Sbjct 180167 GTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGA 180108 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 |||| ||| | || ||| |||| ||||| ||||| || || ||| || | || | Sbjct 180107 ATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACG 180048 Query 75570 TAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 | | || ||| || |||| || | | || ||||| | || ||||||| Sbjct 180047 TCGACCA---GGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGC 179991 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 || ||||| | || ||| | || | || ||||| || | ||||| | ||| Sbjct 179990 ATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGTG 179931 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||||| || | || |||| || || || || ||||| || |||||| || Sbjct 179930 CTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGA 179871 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGG 75783 |||| ||||| |||| ||||||||| | | |||||||| Sbjct 179870 ATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGG 179831 >seq90 Length=319458 Score = 116 bits (128), Expect = 4e-21 Identities = 279/414 (67%), Gaps = 21/414 (5%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||||||||||||| |||| || |||| | || || ||||| || ||||| | Sbjct 219003 TGGTGCCAAGATCCCCAGAGGTGCTATTCTTTCAGGGCCACCGGGTACCGGTAAGACGTT 219062 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCG--CA 175392 || || || | || || || ||| || ||||| | ||| | | || | | Sbjct 219063 GCTAGCAAAGGCTACAGCTGGCGAGTCAGGCGTTCCATTT-TACAGCGTTA-GCGGGTCT 219120 Query 175393 AACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATC 175452 | || || |||||||||||||| || || || | || || ||||| |||| || | Sbjct 219121 GAGTTCGTCGAGATGTTTGTTGGCGTTGGCCCCTCCCGAGTCCGTGATCTGTTTGCAACC 219180 Query 175453 GCCCGCGAAAATCA-ACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG-- 175509 ||||| ||||| || ||| |||||| | |||||||||||||||||||| | || ||| Sbjct 219181 GCCCG-GAAAAACACACCTTGTATTATATTCATTGATGAGATTGATGCTATTGGAAAGTC 219239 Query 175510 --CAACGCAG--CGC---TGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAA 175562 | || || ||| ||||||| | |||||| ||| | || ||| | || Sbjct 219240 GAGATCGAAGAACGCTTATGGTGGT------GGAAATGATGAGCGCGAGAGCACATTGAA 219293 Query 175563 TCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGC 175622 ||| | || ||||| ||||||||||| ||| | | |||||||| | || | Sbjct 219294 TCAGATCCTGACCGAAATGGATGGCTTCAACACCTCGGATCAAGTTGTGGTTCTGGCTGG 219353 Query 175623 CACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGA 175676 || ||||| || |||||||| ||| | || | | || || ||||| ||||| Sbjct 219354 AACCAATCGAGTCGATATCCTAGATAAGGCGTTGTTGCGACCTGGTCGATTTGA 219407 >seq326 Length=563541 Score = 111 bits (122), Expect = 2e-19 Identities = 303/457 (66%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || |||| || | || ||||| ||| || |||||||||||| || || | Sbjct 320245 CCTTTGCACAGCGTCTCGTCGCCTTTGCTGCTGTCGAAGGTATCTTCTTCAGTGGATCCT 320186 Query 65129 TCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 | |||| | || | ||| |||||||||| || || ||||||||||| ||| || ||| Sbjct 320185 T-TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAAT 320127 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || ||||| || || ||||||||| | ||| || || ||| |||||| Sbjct 320126 GAGCTTATCTCTCGTGATGAGGGTTTACACACTGACTTCGCCTGCCTTCTCTTCTCTCAC 320067 Query 65248 TTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 |||| | | |||| | || || | || ||| | | ||| || || | || Sbjct 320066 CTGCGCCACCGCCCCAGCCCAGAGGCTGTTCAGAAAATCATCACAGAAGCTGTCGCCATC 320007 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||| | | |||| || || || |||||||| || |||| |||||| | || Sbjct 320006 GAGCAGGAGTTCCTCACAGATGCTCTCCCATGCGCACTTCTCGGAATGAACGCCAAGCTC 319947 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426 |||| | | ||||| |||| ||| | ||||| |||||| |||| | | || Sbjct 319946 ATGTGCCAATACATCGAGTTTGTTGCTGATCGACTCCTC------GTTGCTCTGGGCAAT 319893 Query 65427 CA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACAT-TAGCCTTGA-TG 65479 | | | ||| | | || ||||| || || ||||| ||||| | || ||| || Sbjct 319892 AAGAAAGTCTACAACTCTACCAACCCATTCGATTTCATGGACAACATCTCGC--TGACTG 319835 Query 65480 GGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 | ||||| ||||||||||||||||| ||||| ||||| Sbjct 319834 GAAAGACTAACTTCTTTGAGAAGCGTGTTGGTGACTA 319798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566684266080