Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq246 122 2e-22
>seq246
Length=239075
Score = 122 bits (134), Expect = 2e-22
Identities = 169/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || ||||| | | || || || ||||| | || | ||| || ||||||
Sbjct 189410 ATTTGCATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTA 189469
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || || | || | | ||| || | |||||||||||| ||||| | | ||| |||
Sbjct 189470 TAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGA 189529
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || |||||||||||||| ||||| | ||| | ||| ||| ||||| |||
Sbjct 189530 TCGGGGGGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAA 189589
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||| ||||| || || || || || || || || ||||| || || |||||||||
Sbjct 189590 CTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646
Score = 93.3 bits (102), Expect = 8e-14
Identities = 155/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| || || || | || ||||| |||| || | || | ||| || ||||||
Sbjct 189638 ATTTGCATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTG 189697
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| || || | || | | || || | || || ||||| || |||| | ||| ||
Sbjct 189698 TAATCAGAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGG 189757
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || |||||||||||||||||||| | || | || || ||||||||
Sbjct 189758 TCTGGAGGAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT 189817
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTAC 193348
||||| || ||||| || || || ||||| || || ||||| ||
Sbjct 189818 GACTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899650002939120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |