Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq246 122 2e-22 >seq246 Length=239075 Score = 122 bits (134), Expect = 2e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | || || || ||||| | || | ||| || |||||| Sbjct 189410 ATTTGCATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTA 189469 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | || | | ||| || | |||||||||||| ||||| | | ||| ||| Sbjct 189470 TAATCCGAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGA 189529 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || |||||||||||||| ||||| | ||| | ||| ||| ||||| ||| Sbjct 189530 TCGGGGGGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAA 189589 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||| ||||| || || || || || || || || ||||| || || ||||||||| Sbjct 189590 CTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646 Score = 93.3 bits (102), Expect = 8e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || || | || ||||| |||| || | || | ||| || |||||| Sbjct 189638 ATTTGCATTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTG 189697 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || | || | | || || | || || ||||| || |||| | ||| || Sbjct 189698 TAATCAGAAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGG 189757 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||||||||||||||| | || | || || |||||||| Sbjct 189758 TCTGGAGGAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT 189817 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTAC 193348 ||||| || ||||| || || || ||||| || || ||||| || Sbjct 189818 GACTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899650002939120