Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq246 107 3e-18
seq326 100 4e-16
>seq246
Length=239075
Score = 107 bits (118), Expect = 3e-18
Identities = 149/207 (72%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || ||||||| |||| ||||| || || ||| | |||||||| |||
Sbjct 189646 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 189587
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| || || ||| ||||| ||||||||||||||||| || || || ||
Sbjct 189586 AGATACGATTGACAATGTTAAATCAAAAATTCAAGATAAAGAAGGCATCCCCCCCGATCA 189527
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| | | |||| ||||| || || || || ||| | ||| | || |||||||
Sbjct 189526 GCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATA- 189468
Query 156002 TATATCCAAA--GAGGCGACGCTTCAT 156026
||||||||| ||| | || ||||||
Sbjct 189467 -ATATCCAAAAGGAGTCCACTCTTCAT 189442
Score = 95.1 bits (104), Expect = 2e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || ||||||| |||| || ||||||||||| | ||||| || ||
Sbjct 189417 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 189358
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| |||||| |||||||| ||||| || || || || ||
Sbjct 189357 GATACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCAG 189298
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | ||| ||||| |||||||| ||| | ||| | || || || |||
Sbjct 189297 CAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAAT 189238
Query 156003 AT 156004
||
Sbjct 189237 AT 189236
>seq326
Length=563541
Score = 100 bits (110), Expect = 4e-16
Identities = 204/296 (69%), Gaps = 8/296 (3%)
Strand=Plus/Plus
Query 18414 CTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTT 18473
|||||| || || ||||| || ||||| | | || || |||| || || ||| |||
Sbjct 320395 CTTTGGT-TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTT 320453
Query 18474 CCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC-GGGATATTGAAT-CTCGCTATA 18531
|||| ||||| |||| || || ||| ||||| |||| | || | ||| | |
Sbjct 320454 CCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTC-CGCTG 320512
Query 18532 AAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAAC 18591
||| | || || | |||||||| || || || || | | ||||| |||||||| ||
Sbjct 320513 AAA-CGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGAC 320571
Query 18592 ATATTTAATGAAATGTTTTTCATTATCCTTGAG---ATTGTTCCATTCATCTATATCTTT 18648
| | ||||| | | || | ||| || | ||||||||| |||| | ||||||
Sbjct 320572 GTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTT 320631
Query 18649 TGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704
|| |||||||||||||| | |||||||| |||| || || | ||||||||||
Sbjct 320632 CGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTT 320687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731868422975600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |