Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq246 109 1e-18 >seq246 Length=239075 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || || || | || || |||| || | ||||||||||||||||||| | Sbjct 189235 GATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACG 189294 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 || ||||| ||||| || ||||| |||||||| |||||| ||| |||||| || | Sbjct 189295 TTGCTGATCCGGTGGGATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGT 189354 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || || ||||| || ||||| ||||| || || | ||||||| || || || Sbjct 189355 ATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTG 189414 Query 192534 CAT 192536 ||| Sbjct 189415 CAT 189417 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || | ||| | ||| | ||| || |||||||||||| Sbjct 189416 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 189475 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||| || || || || | | ||| ||||| || Sbjct 189476 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 189535 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||| ||||| || | |||||| || Sbjct 189536 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 189595 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || ||||| || || || | ||||||| || || |||||| Sbjct 189596 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| | || || || | ||| | ||| || ||||| |||||||| | || || Sbjct 189656 AGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGA 189715 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 | || |||| || || || || ||||||| | ||| || || || || || |||||| Sbjct 189716 CCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCT 189775 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 |||||||||||||| || || || || | ||| || || || || ||||| || Sbjct 189776 TTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTG 189835 Query 192499 ATGGTTTTACCAGTTAATGTTTT 192521 ||||| ||||| || | ||||| Sbjct 189836 ATGGTCTTACCGGTGAGAGTTTT 189858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984475068062850