Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq246 109 1e-18
>seq246
Length=239075
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
|||||| || || || | || || |||| || | ||||||||||||||||||| |
Sbjct 189235 GATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACG 189294
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
|| ||||| ||||| || ||||| |||||||| |||||| ||| |||||| || |
Sbjct 189295 TTGCTGATCCGGTGGGATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGT 189354
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
||| || || ||||| || ||||| ||||| || || | ||||||| || || ||
Sbjct 189355 ATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTG 189414
Query 192534 CAT 192536
|||
Sbjct 189415 CAT 189417
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | ||||| | || | ||| | ||| | ||| || ||||||||||||
Sbjct 189416 ATGCCACCACGGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCC 189475
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | |||||| || || || || | | ||| ||||| ||
Sbjct 189476 GAGAGAGTACGACCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGG 189535
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||||||||| ||||| ||| ||||| || | |||||| ||
Sbjct 189536 GGGATGCCTTCTTTATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCG 189595
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| || || ||||| || || || | ||||||| || || ||||||
Sbjct 189596 ACTTCAAGTGTGATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646
Score = 87.8 bits (96), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||||| | || || || | ||| | ||| || ||||| |||||||| | || ||
Sbjct 189656 AGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGTACGA 189715
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
| || |||| || || || || ||||||| | ||| || || || || || ||||||
Sbjct 189716 CCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCT 189775
Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498
|||||||||||||| || || || || | ||| || || || || ||||| ||
Sbjct 189776 TTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTG 189835
Query 192499 ATGGTTTTACCAGTTAATGTTTT 192521
||||| ||||| || | |||||
Sbjct 189836 ATGGTCTTACCGGTGAGAGTTTT 189858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984475068062850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |