Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq279 129 2e-24
seq359 95.1 4e-14
seq223 84.2 6e-11
>seq279
Length=233879
Score = 129 bits (142), Expect = 2e-24
Identities = 351/534 (66%), Gaps = 5/534 (1%)
Strand=Plus/Plus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | |||||| || ||||| || || |||||||| |||||| ||| ||||
Sbjct 179939 TCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATATGCCATGGC 179998
Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086
|| || || || ||||| || | |||| || ||||| || || || | |||
Sbjct 179999 TCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACGTATCTGGCA 180058
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| |||||||| || | |||||||||| ||| || || |||| |||||| ||||| |
Sbjct 180059 GTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTCGTTCCAGCA 180118
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTA 156206
|| | ||||||| || | ||||| | || ||||||||||| | ||
Sbjct 180119 ATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCAATACCACCGGCGGTCTTT 180178
Query 156207 GAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
|||||| |||| || || | || | |||| || || || || || | |||
Sbjct 180179 GAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTCTTCCTTCATA 180238
Query 156267 GATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGT 156326
| || ||||||| | ||||| | || || ||||||||||| || |||||
Sbjct 180239 TCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAAGAGGGTAGGA 180298
Query 156327 GTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC-CTTAATCTTCTCAAG 156385
| |||||| | || ||||| | ||||| | |||||||| | | |||| || |
Sbjct 180299 GAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTCTCAATGACTCTT-TCCAC 180357
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
| | ||||| || | |||| || | ||| ||| ||||| || |||||| |||
Sbjct 180358 GTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGGCGCTCTGCAAC 180417
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
| |||| ||||| || | ||| | | ||||| || || || ||||||||
Sbjct 180418 CTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTGAATCCGAAATA 180471
>seq359
Length=463009
Score = 95.1 bits (104), Expect = 4e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 354015 GGCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAAC 354074
||||||| | || |||||||||||||| ||||| ||||| |||||||| |||| || |
Sbjct 303408 GGCGAGACCGCCCAGCGAGTCACGGTCAAGGAAGTTAGTTGGTTCGTCGAGGACGAGCAG 303349
Query 354075 GTGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134
||| || | ||||||| || | || || || || || |||||||| |||||||| ||
Sbjct 303348 GTGTGGATTGTTCCACATGGCGCCGGCGAGGACGACTTTGACCTTCTGACCGCCTGAGAG 303289
>seq223
Length=582525
Score = 84.2 bits (92), Expect = 6e-11
Identities = 103/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || ||||| |||| ||||| |||||||| |||||||||
Sbjct 178141 AGAATTTCCTTGAGACGTGGTACACCGAGGGTAACGTT---CTTGGACGACACACCAGCA 178197
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| ||||| ||||||| || | || || | ||||| ||||| |||||||| |
Sbjct 178198 AAATGGAAGGTATTCAAGGTCATCTGCGTTGCCGGCTCTCCAATTGACTGTGCCGCCAAA 178257
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| |||||
Sbjct 178258 ACGCCCACCATTTCACCTGG 178277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810226653767
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |