Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq246 129 5e-25
>seq246
Length=239075
Score = 129 bits (142), Expect = 5e-25
Identities = 171/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| ||||||| || ||||| |||||||||||||| ||||| || | ||
Sbjct 189417 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 189358
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || || | |||| | ||| |||||||| || ||||| || || || |||||
Sbjct 189357 GATACCATTGATAATGTTAAATCTAAA-ATCCAAGATAAGGAAGGTATCCCACCGGATCA 189299
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTAT 24880
|||||| | |||||||| || |||||||| |||||| ||| || | | || || ||
Sbjct 189298 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCG-GACTC-TTTCGGACTAC 189241
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || || ||||| || || || |||| || ||||||| || |||
Sbjct 189240 AATATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGGC 189190
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AAC 24777
||||| || |||||||| || || || || || || || | |||| || | || |||
Sbjct 189858 AAAACTCTCACCGGTAAGACCATCACCCTAGAGGTGGAGTCATCCGATACCATCGACAAC 189799
Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837
| ||| | ||| || ||||| |||||||| || ||||| || || || || | |||||
Sbjct 189798 GTTAAGTCGAAA-ATACAAGATAAAGAAGGCATTCCTCCAGACCAGCAGCGCCTAATCTT 189740
Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897
||||| || ||||||||||| | | | | || ||||| || ||||| ||||| ||
Sbjct 189739 CGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTTTCTGATTACAATATTCAGAAGGAGTC 189680
Query 24898 GACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || |||||||| | || |||| |||||
Sbjct 189679 CACTCTTCACTTGGTTCTTCGTCTGCGTGGAGG 189647
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || ||||| || |||||||| || | || ||| | || | || ||
Sbjct 190157 ACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGTCC 190098
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|| || || ||||| ||||| || ||||| || || |||||| |||| || ||||| ||
Sbjct 190097 AAAATTCAGGACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCAAG 190038
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||| ||||||| | | | | || |||||||||||||| ||||| || || || |||
Sbjct 190037 CAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCCAC 189978
Query 24908 TTGGT 24912
|||||
Sbjct 189977 TTGGT 189973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449895401125480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |