Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq350 109 9e-18 seq57 109 9e-18 seq357 95.1 2e-13 seq279 89.7 8e-12 >seq350 Length=163062 Score = 109 bits (120), Expect = 9e-18 Identities = 316/472 (67%), Gaps = 16/472 (3%) Strand=Plus/Minus Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 || || |||||||| || ||||| || |||||||| || |||||||| || | ||| Sbjct 18321 GCCAACGCAAAGATTTTCCGCTGATCAACTCCGCCAAATTGCGCGTCGACATCCAAATGC 18262 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTG--AGCGGCGGGTTGCGGT 2411620 | ||| || | || |||||||||||||| | ||| ||| ||||||| ||| Sbjct 18261 TCCTCATCCAACGCTTGCATGAGCGGGTATATGAG--CCCTGACAGCGGCGCATTGTCAA 18204 Query 2411621 CCATCTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCG- 2411677 || ||| || |||| || ||||||||| ||| ||||| | ||||| | ||| | Sbjct 18203 CCTGCTTCACAACCTCCGCACCGGCCTTTTTCGCATCGTGC--TCCGTCAC-CACGCTGC 18147 Query 2411678 TCAGGCGCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAA 2411737 | || | || ||||| | ||||| |||| ||||||| || ||||| | || | Sbjct 18146 TGAGTCTGAATAGGTCCATGGTGTATCGGGCGGAGAGCTGGTAGTCACTGCCCAGGACGA 18087 Query 2411738 ATTCGAGACGATCCAGCGGGACGCCAATGTGCTGGAGCATGGCCTTGATGGCAAACTCGT 2411797 | ||||| || | ||||| ||| | ||| | ||| |||| | | || Sbjct 18086 ACTCGAGTTTCTCGATGGGGACATGGATGGCTTCGAGGAGGGCGGTGATTACGTAGCGGT 18027 Query 2411798 ACCA-GCGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCG 2411856 | | |||| |||| | |||||||| || | || ||||||||| | || Sbjct 18026 AGTATTCGGC-GCGGTAGTTGACGAGGTTAATGGGTGCTTTCAGGTTGTCGAGGAAGCCG 17968 Query 2411857 TGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTA 2411916 || | ||| || | |||||| | || | || || || ||||| |||| ||| ||||| Sbjct 17967 TGGATGTCTGCTAGGAGGATTTTGACGTGGCAGCCTGCTTGGAGGAAGTGGGCGAGTTTG 17908 Query 2411917 AAGAT-GGGCACAAAGTAGCC-CAGATGGGGCTTGCCCGTCGGCGCGGTGCC 2411966 | ||| ||||| |||||||| ||| || ||| |||| || | |||||||| Sbjct 17907 ACGATCGGGCA-GAAGTAGCCGCAG-TGTGGCCTGCCGGTTGTTGCGGTGCC 17858 >seq57 Length=340642 Score = 109 bits (120), Expect = 9e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||||||||| || || ||||| |||| || || | || ||||||||||| ||||| Sbjct 145453 GCCGCCAACTATCTTGATATCAAAGCCCTGCTAGACGTAGGCTGCAAGACCGTCGCCAAT 145394 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | ||||||||||||||||| || || ||||| |||||||| |||||| || ||| Sbjct 145393 TTGATCAAGGGCAAGTCGCCAGATGATATCCGGAAGACCTTCAACATCCAGAACG 145339 >seq357 Length=150078 Score = 95.1 bits (104), Expect = 2e-13 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 2019250 CGGCGGCCCAGCAGGCCCTCCGATCGA-CCATGGAAAAGTACACCAACACGACGCGGTTT 2019308 ||||| ||||||| |||||||| |||| ||||||| | || ||| || || || || Sbjct 99990 CGGCG-CCCAGCAAGCCCTCCG-TCGAACCATGGAGATATATTCCACAACCACCCGCTTC 100047 Query 2019309 GCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATC 2019368 || | |||||||| |||| | |||||||| |||| || ||| || |||||| Sbjct 100048 GCATTCGCCTGCAATCAGTCGAATAAAATCATCGAACCCCTGCAATCCCGCTGTGCCATC 100107 Query 2019369 TTGCGCTTTGCGCGCCTCACCGACGCCCAGATC 2019401 |||||| |||||||||||| |||||||| ||| Sbjct 100108 CTGCGCTATGCGCGCCTCACGGACGCCCAAATC 100140 >seq279 Length=233879 Score = 89.7 bits (98), Expect = 8e-12 Identities = 193/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || | || |||| || || ||||||||||| || |||| ||||| || Sbjct 180040 CTGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGA 180099 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||| || || || || | ||||| || | | || | ||| | || || Sbjct 180100 AGAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACC 180159 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||| || || || || || ||||||| || || || |||||||| Sbjct 180160 AATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTC 180219 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| ||||||| || | || |||||||| | | || || | | || || Sbjct 180220 GATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACC 180279 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATG 2073828 || |||||||| || || | || ||| | ||| ||| |||||| Sbjct 180280 AGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATG 180328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916204807546649