Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq246 105 4e-18
seq12 104 2e-17
seq257 95.1 8e-15
>seq246
Length=239075
Score = 105 bits (116), Expect = 4e-18
Identities = 127/172 (74%), Gaps = 8/172 (5%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
|||||||||||||||||| || || ||| |||| | || |||| ||||| ||||||||
Sbjct 189990 CTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAA 190049
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| ||||||||||| | || | ||| |||||||| | ||||| |||||
Sbjct 190050 AATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGAATTTTGGACTTGAC--- 190106
Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953
|||||||| ||| | ||| || || | |||||| |||||||| ||
Sbjct 190107 -ACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAGTCTTTCCGGT 190157
Score = 102 bits (112), Expect = 5e-17
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||| ||| ||||||||||| || | |||||||||||||| || || ||||||||
Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| | || |||| || || || || || || ||||| || |||||||| || | ||
Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926
| || ||||| || | ||||| ||| || || |||| || || | |||
Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAAC--AT--TATCAATGGTATCGGAGCTCTC 189366
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| |||| || || || || || || ||||| || || ||||| ||||||
Sbjct 189367 AACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 189418
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| ||| |||||| || || ||||| ||||| || | || ||||
Sbjct 189434 AGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCC 189493
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| ||||| ||||||||||| || || || ||||| || | || | || || || ||
Sbjct 189494 TCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCT 189553
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| |||||| ||| || | |||| || |||||| |||| || ||||||
Sbjct 189554 TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTC 189613
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || ||||| || || ||||| |||||
Sbjct 189614 TTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645
Score = 98.7 bits (108), Expect = 6e-16
Identities = 155/222 (70%), Gaps = 10/222 (5%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| | || | || |||| ||||| ||| |||||||||||| || || || |
Sbjct 189645 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 189704
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| ||| | || | || ||||| ||||| ||||||||||| || || ||||||||| | |
Sbjct 189705 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 189764
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGC 34923
| | || || || || | |||||| || ||| |||| ||||| | |
Sbjct 189765 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT-----GA 189819
Query 34924 CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
||| || || | ||| |||||||| || ||||| || || ||
Sbjct 189820 CTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861
>seq12
Length=85050
Score = 104 bits (114), Expect = 2e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
|||||| ||||| | ||| ||||||||||||||| ||||| || ||| |||| | ||
Sbjct 76198 CAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTC 76139
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || || || |||||||||||||| ||||||||||| | || | |||||||||||
Sbjct 76138 CTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTC 76079
>seq257
Length=236519
Score = 95.1 bits (104), Expect = 8e-15
Identities = 134/186 (72%), Gaps = 8/186 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| || ||||| || ||| | || | || || || ||||| || |||||||
Sbjct 59006 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 59065
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| ||||| || | || | ||||||||||| | |||||| || || ||
Sbjct 59066 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTAC--AT- 59122
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || ||| |||||| || | ||| |||||||| ||||||||||||||
Sbjct 59123 -TGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 59181
Query 34964 ACAAAG 34969
|| |||
Sbjct 59182 ACGAAG 59187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691247972029
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |