Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq246 105 4e-18 seq12 104 2e-17 seq257 95.1 8e-15 >seq246 Length=239075 Score = 105 bits (116), Expect = 4e-18 Identities = 127/172 (74%), Gaps = 8/172 (5%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||||||||| || || ||| |||| | || |||| ||||| |||||||| Sbjct 189990 CTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAA 190049 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||||| | || | ||| |||||||| | ||||| ||||| Sbjct 190050 AATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTTGTCCTGAATTTTGGACTTGAC--- 190106 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGT 34953 |||||||| ||| | ||| || || | |||||| |||||||| || Sbjct 190107 -ACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTATAGTCTTTCCGGT 190157 Score = 102 bits (112), Expect = 5e-17 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| ||| ||||||||||| || | |||||||||||||| || || |||||||| Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || || || || || ||||| || |||||||| || | || Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTC 34926 | || ||||| || | ||||| ||| || || |||| || || | ||| Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAAC--AT--TATCAATGGTATCGGAGCTCTC 189366 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||| || || || || || || ||||| || || ||||| |||||| Sbjct 189367 AACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCATG 189418 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| |||||| || || ||||| ||||| || | || |||| Sbjct 189434 AGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACCATCC 189493 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| ||||||||||| || || || ||||| || | || | || || || || Sbjct 189494 TCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATCT 189553 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | |||||| ||| || | |||| || |||||| |||| || |||||| Sbjct 189554 TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTC 189613 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| || || ||||| ||||| Sbjct 189614 TTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645 Score = 98.7 bits (108), Expect = 6e-16 Identities = 155/222 (70%), Gaps = 10/222 (5%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | || | || |||| ||||| ||| |||||||||||| || || || | Sbjct 189645 TTCCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAG 189704 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | || | || ||||| ||||| ||||||||||| || || ||||||||| | | Sbjct 189705 AAAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAG 189764 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGC 34923 | | || || || || | |||||| || ||| |||| ||||| | | Sbjct 189765 GAATGCCTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGAT-----GA 189819 Query 34924 CTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 ||| || || | ||| |||||||| || ||||| || || || Sbjct 189820 CTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGAC 189861 >seq12 Length=85050 Score = 104 bits (114), Expect = 2e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | ||| ||||||||||||||| ||||| || ||| |||| | || Sbjct 76198 CAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTC 76139 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || || |||||||||||||| ||||||||||| | || | ||||||||||| Sbjct 76138 CTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGGATTCCCTCCTTGTC 76079 >seq257 Length=236519 Score = 95.1 bits (104), Expect = 8e-15 Identities = 134/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| || ||||| || ||| | || | || || || ||||| || ||||||| Sbjct 59006 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 59065 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||| || | || | ||||||||||| | |||||| || || || Sbjct 59066 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTAC--AT- 59122 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || ||| |||||| || | ||| |||||||| |||||||||||||| Sbjct 59123 -TGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 59181 Query 34964 ACAAAG 34969 || ||| Sbjct 59182 ACGAAG 59187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691247972029