Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4 127 2e-23 >seq4 Length=94551 Score = 127 bits (140), Expect = 2e-23 Identities = 881/1396 (63%), Gaps = 33/1396 (2%) Strand=Plus/Plus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| || || || | ||||| |||||||| |||||||| || || | | || || Sbjct 74083 ATACCGTTCGCGTCGACGTCAAAGGTGACTTCGATTTGAGGAACGCCACGGGGCGCGGGG 74142 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | || | || || || ||||| || ||| |||||| Sbjct 74143 GGGATACCGGTTAGCTCGAACTTGCCGAGGAGGTTGTTATCCTTGGTGCGGGCACGTTCA 74202 Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620 ||||| || | ||||| || | | || || || | | ||| || | | ||| Sbjct 74203 CCCTCAAAGACCTGGATGAGCACGCCTGGCTGGTTGTCGGCA-AAGGTGGAGAACGTCTC 74261 Query 281621 -GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGC 281679 || || || || || || |||||||| | || | |||||| | ||||| || Sbjct 74262 AGACTTCTTGGTGGGGATAGTGGTGTTTCTCTTGATGAGTGGGGTCATGACGCCACCCGC 74321 Query 281680 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 281737 || || | ||| | ||| ||||||| ||| |||| || | || | || | || || Sbjct 74322 AGTCTCGATACCGACAGACAGAGGAGCGACGTCAAGGAGAAGGATTTCATTGGTAGACTT 74381 Query 281738 TCA--TCAGTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCT 281794 | || || | |||| |||||| | || || || | || ||||||||||||||||| Sbjct 74382 GGACGTC-GTGTCACCAGACAAGA-TGGCGGCCTGGACGGCGGCACCATATGCAACAGCC 74439 Query 281795 TCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGT 281854 || || || || | | | ||| | | || || ||||| || | || | ||| | | Sbjct 74440 TCGTCGGGGTTGATGGACTTGTTTGGCTCCTTGCCGTTGAAGAAGTCGGATACAAGCT-T 74498 Query 281855 CTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 281913 || | || ||||| | ||||| || || | || || ||||| || ||||| Sbjct 74499 CTGGATGCGGGGGATACGGGTGGATCCACCCACAAGGACTATCTCATGGACGCTAGATTT 74558 Query 281914 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTC 281973 ||| | |||| ||| | || ||||| || || | | | || | ||| Sbjct 74559 ATCGATCTTTGCATCGCGGAGCACGCGCTCAACAGGGTCCATGGTGGAGCGGAAGAGGTC 74618 Query 281974 TGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAA 282033 ||||| || ||||| ||| | ||| | | | || ||||||| || ||| | Sbjct 74619 CTGGCAAAGCTCCTCGAAACGAGCACGAGTGATGGAGGTATAGAAATCAATGCCCTCGTA 74678 Query 282034 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 282093 | || || | ||| || | || || | | ||| || || | || || |||||||| Sbjct 74679 TAGGGAGTCGATTTCGATGGATGTCTGTGCGGCAGAGGAGAGGGTGCGCTTGGCACGTTC 74738 Query 282094 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC---TGATTGATTCAAATCTGTTTTATA 282150 || || || | || | || | ||| || ||| ||| | ||| | || | Sbjct 74739 GCAGGCAGTGCGGAGACGGCGGAGGGCACGAGCATTTGAA-GAT--AGATCCTTCTTGTG 74795 Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210 || | |||||| || | ||| | | || || || ||||| ||||| ||||| || Sbjct 74796 CTTGCGCTTGAATTCATTGACAAAGTGGTTCACGAGGCGGTTATCGAAATCCTCACCACC 74855 Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270 | | || | || | || | | |||| ||| | || ||||| | || | || Sbjct 74856 AAGATGGGTGTCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCTTCGATAGTGAGGAG 74915 Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330 | |||||| ||| |||||||||| || || || || || || ||| || Sbjct 74916 GGAGACATCAAAGGTACCACCACCCAAGTCGAAGATGAGAACGTTGCGTTCACCCTCGGC 74975 Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390 || || ||||||||||| |||| || |||||||| ||||| || ||||| | | || Sbjct 74976 CTTCTTGTCAAGACCATAGGCAATGGCGGCAGCAGTGGGTTCGTTGATAATCCGAAGGAC 75035 Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450 ||| || ||||| || || ||||| || || ||||| | || |||||||| ||||| Sbjct 75036 ATTCAGGCCAGCGATGAGACCAGCATCCTTGGTAGCTTGACGCTGGGAATCGTTGAAATA 75095 Query 282451 TGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTTT 282509 || || ||||||| ||||| | |||| ||| ||||| || | || |||| Sbjct 75096 GGCGGGGACAGTAACGACGGCGT-TGTTAACTGTGCCTCCAAGGTAGGACTCGGCAGTTT 75154 Query 282510 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCAT 282569 | |||| || | | | ||| || || |||| || || | | ||||| ||| Sbjct 75155 CTCTCATCTTCGTCAGGACCATGGAGGAGATTTCCTCCGGGGTGAACTGCTTCTCTTCGC 75214 Query 282570 TTTGATATGATACTTCAA--AATATG-GTTTATTACCAACATT---AATAACTTTAAATG 282623 | ||| || |||| | ||| | || || | || ||| || || || | Sbjct 75215 CCT----TGA-AC-TCAACGGAGATGACTGGCTTTCCCGCCTTGTCAATGACCTTGAAGG 75268 Query 282624 GCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGT 282682 | | | ||||| || ||||| || || || || || | | ||||| | || Sbjct 75269 GGAAGTGCTTCATGTCGGATTGGAC-CTCAGGATCGGCGAATTTGCGGCCAATGAGACGC 75327 Query 282683 TTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCA 282742 || || ||||| | || |||| || || | || |||||| |||||| ||||| || Sbjct 75328 TTGGCGTCAAAGACTGTGTTGGAGGGGTTCATGGCGACTTGATTTTTGGCGGCATCCCCG 75387 Query 282743 ATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCA 282802 |||||| | || || ||||| || | ||| | || || || || || ||||| || || Sbjct 75388 ATCAGACGCTCGGTGTCTGTGAAGGCAACGAACGAGGGTGTGGTCCGGTTACCCTGGTCG 75447 Query 282803 TTCGCAATAATTTCAA 282818 || ||||| ||||||| Sbjct 75448 TTGGCAATGATTTCAA 75463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740611203552366