Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq246 134 3e-26
seq257 93.3 8e-14
>seq246
Length=239075
Score = 134 bits (148), Expect = 3e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | || ||||| || || || || ||||||||||| || ||| | | |||
Sbjct 189430 ACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGACC 189489
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || ||||||||||| || || || || | || ||||| || || || ||||| ||
Sbjct 189490 ATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTT 189549
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||| |||| ||| ||||| ||||||||||| | || ||||| | || ||
Sbjct 189550 ATCTTGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGAT 189609
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || |||| || || || || || ||||||
Sbjct 189610 GGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCATT 189646
Score = 125 bits (138), Expect = 1e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | ||| | ||| || | || ||||| || ||||| ||||| || || ||
Sbjct 189191 CCACCCCGCAATCTCAGGACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAA 189250
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
||| | | ||| || || || ||||| |||||||||||||| | ||| ||||| || ||
Sbjct 189251 AGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGG 189310
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762
|| |||||||||||||| || || | ||| ||||| ||||| ||||| || | || ||
Sbjct 189311 ATACCTTCCTTATCTTGGATTTTAGATTTAACATTATCAATGGTATC-GGAGCTCTCAAC 189369
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||| | || || || ||||| |||| || || || || || |||||
Sbjct 189370 TTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAACGAAGATTTGCAT 189417
Score = 107 bits (118), Expect = 4e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| ||||| ||||| ||||| || || ||||| || ||||||||||| || | | |||
Sbjct 189966 ACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGAAAGGGTGCGACC 190025
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || | || || || || || || || | ||| || || ||||| || ||||||||
Sbjct 190026 GTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGGAATCCCTTCCTT 190085
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| ||||| || | || ||| | || || |||||| | || ||||| | |||||
Sbjct 190086 GTCCTGAATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAACTTCGAGGGTTAT 190145
Query 82775 CGTCTTGCCTGT 82786
||||| || ||
Sbjct 190146 AGTCTTTCCGGT 190157
>seq257
Length=236519
Score = 93.3 bits (102), Expect = 8e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
||||| |||||||||||| ||| ||| ||||| || || || || ||||| |||||
Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATC 59067
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
| || || ||||| || || || || ||||| || || || || | |||||||| ||
Sbjct 59068 AATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGTCG 59127
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|| ||||| | | || || || | || || |||||||| || | ||||| || ||
Sbjct 59128 ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 59186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981822281352549
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |