Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq246 111 2e-19 seq257 96.9 3e-15 seq279 82.4 7e-11 >seq246 Length=239075 Score = 111 bits (122), Expect = 2e-19 Identities = 139/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| ||||||||||| | || |||| |||||| |||||||||| Sbjct 189677 GTGGACTCCTTCTGAATATTGTAATCAGAAAGGGT--ACGACCGTCCTCCAGCTGCTTGC 189734 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| ||||| |||||||| || || || || || Sbjct 189735 CGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCCTTCTTTATCTTGTATTTTCGACT 189794 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | || |||| | |||||| || | ||||| ||| || ||||| |||| Sbjct 189795 TAACGTTGTCGATGGTATCGGATGACTCCACCTCTAGGGTGATGGTCTTACCGGTGAGAG 189854 Query 133642 TTTTTACGA 133650 |||| |||| Sbjct 189855 TTTTGACGA 189863 Score = 100 bits (110), Expect = 3e-16 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 |||||||| || || ||||| ||||| | | | | |||| ||||| || || || | Sbjct 189449 GTGGACTCCTTTTGGATATTATAATC--CGAGAGAGTACGACCATCCTCAAGTTGTTTTC 189506 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||| ||||| ||||||||||| || || ||| ||||| | Sbjct 189507 CGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCTTTATC-TTGAATTTTTGAT 189565 Query 133582 TGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | | | | |||| ||| || | ||| || || | |||| ||| || |||||||| Sbjct 189566 TTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGTGATGGTCTTTCCGGTCAGG 189625 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| ||||| || ||||| Sbjct 189626 GTTTTAACGAAGATTTGCAT 189645 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| |||||||| || | || ||| | ||||||||||| || || || Sbjct 189226 CTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCA-TCCTCGAGCTGTTTACCAGCAA 189284 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC- 133586 | || || || ||||| || || ||||| |||||||| || ||| ||| | || | | Sbjct 189285 AGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGGAT-TTTAGATTTAACA 189343 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| || |||| | ||| || || | || | |||||||||||||| ||||| Sbjct 189344 TTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTA 189403 Query 133647 ACGAAAATCTGCATG 133661 ||||| || |||||| Sbjct 189404 ACGAAGATTTGCATG 189418 >seq257 Length=236519 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/181 (72%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||| ||||| ||||| | | ||| || || ||||||||||||||||| ||| | | Sbjct 59008 TTCTGGATATTATAATCACTTAGCGTTCGGCCG--TCCTCGAGCTGCTTGCCAGCGAAGA 59065 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCT 133590 | | |||||||| ||||| ||||| || |||||||| || || ||| | | | Sbjct 59066 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 59125 Query 133591 CAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGA 133650 | | || ||| ||| ||| || |||| ||||| ||| ||||| || || || || |||| Sbjct 59126 CGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 59185 Query 133651 A 133651 | Sbjct 59186 A 59186 >seq279 Length=233879 Score = 82.4 bits (90), Expect = 7e-11 Identities = 203/307 (66%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGA 149531 || ||||||||||||||||| |||||| | || ||||||||| ||| || || Sbjct 180209 TAAATGCCCTCGATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGC 180268 Query 149532 AAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATC 149591 | || || || ||| | ||| || ||| || || || || || || ||| Sbjct 180269 TGGGGAGTACCAGCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATG 180328 Query 149592 ATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | | || | ||| | || | |||| |||||| || ||||| || || || || ||| Sbjct 180329 AGGTTATATGTCTCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGC 180388 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTTGAGCAAGTAGCCG 149708 || | ||| ||||| || ||||| || || ||| ||| ||| |||||||| Sbjct 180389 ATAATCATGTGCTGTGGGCGCTCTGCAACCTTG---CCATTGATTCGAAGCAAGTAAGAC 180445 Query 149709 TTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCG 149768 | || || |||||| | || || || | ||||| |||||||| ||| |||| || Sbjct 180446 CTCTCCAGGGTCTTGAATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCT 180505 Query 149769 GCGTCGA 149775 | || || Sbjct 180506 GAGTTGA 180512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418437280840