Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq279 154 3e-32 >seq279 Length=233879 Score = 154 bits (170), Expect = 3e-32 Identities = 449/691 (65%), Gaps = 3/691 (0%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||| || ||||| || || || | |||| || ||||| |||||||| || | Sbjct 180471 TATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCA 180412 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 || || || || |||||| || | |||||||| ||||| || || ||| |||| | || Sbjct 180411 GAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAA 180352 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||||| ||| | | | ||||| | | |||||| |||||||| Sbjct 180351 AGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 180292 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || ||||| || ||| || |||| || ||||| || | | || || Sbjct 180291 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 180232 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAAC 110603 || || || || || |||||||| | || ||| |||||| ||||| || | | Sbjct 180231 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 180172 Query 110604 TCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACA 110663 | || || |||||| || || |||| || || | || | | || || | Sbjct 180171 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGA 180112 Query 110664 GCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAA 110723 |||| || |||||| ||| ||||||| ||| | | || ||||| ||||||| | | Sbjct 180111 ACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGA 180052 Query 110724 TATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGG 110780 || || | || || ||||| | | || | ||||| ||||| || || || ||| Sbjct 180051 TACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGG 179992 Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840 ||| ||||| ||||||||||| || || || ||||| || || |||||| | Sbjct 179991 CATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGT 179932 Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA 110900 || |||||| |||| |||| | |||| | ||| |||| |||||||| ||| | | Sbjct 179931 GCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAG 179872 Query 110901 AATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGA 110960 ||||| ||| |||| | ||||| || | || || | | ||||| ||||| Sbjct 179871 AATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGT 179812 Query 110961 AAAGAGTTTGAAGACCTTTACGAAAAATATG 110991 | ||||| || | ||||| || || |||| Sbjct 179811 GATGAGTTCGAGGCTCTTTATGAGAAGTATG 179781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186806854438751