Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq279 154 3e-32
>seq279
Length=233879
Score = 154 bits (170), Expect = 3e-32
Identities = 449/691 (65%), Gaps = 3/691 (0%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||| || ||||| || || || | |||| || ||||| |||||||| || |
Sbjct 180471 TATTTCGGATTCAAGACCCTGGAGAGGTCTTACTTGCTTCGAATCAATGGCAAGGTTGCA 180412
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|| || || || |||||| || | |||||||| ||||| || || ||| |||| | ||
Sbjct 180411 GAGCGCCCACAGCACATGATTATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAA 180352
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|| ||||| ||| | | | ||||| | | |||||| ||||||||
Sbjct 180351 AGAGTCATTGAGACATATAACCTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACC 180292
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543
|| || ||||| || ||| || |||| || ||||| || | | || ||
Sbjct 180291 CTCTTCAACGCTGGTACTCCCCAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAG 180232
Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAAC 110603
|| || || || || |||||||| | || ||| |||||| ||||| || | |
Sbjct 180231 GAAGACAGCATCGAGGGCATTTATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACC 180172
Query 110604 TCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACA 110663
| || || |||||| || || |||| || || | || | | || || |
Sbjct 180171 GCCGGTGGTATTGGTCTTAACATTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGA 180112
Query 110664 GCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAA 110723
|||| || |||||| ||| ||||||| ||| | | || ||||| ||||||| | |
Sbjct 180111 ACGAATGGCTCTTCAAACGGAATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGA 180052
Query 110724 TATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGG 110780
|| || | || || ||||| | | || | ||||| ||||| || || || |||
Sbjct 180051 TACGTCGACCAGGGAGGTAACAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGG 179992
Query 110781 CATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGA 110840
||| ||||| ||||||||||| || || || ||||| || || |||||| |
Sbjct 179991 CATATGGATATTTTTGAATTCTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGT 179932
Query 110841 GCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAA 110900
|| |||||| |||| |||| | |||| | ||| |||| |||||||| ||| | |
Sbjct 179931 GCTCGTGATCTATTCCTTGCACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAG 179872
Query 110901 AATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGA 110960
||||| ||| |||| | ||||| || | || || | | ||||| |||||
Sbjct 179871 AATGGTGAATGGACTCTGTTCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGT 179812
Query 110961 AAAGAGTTTGAAGACCTTTACGAAAAATATG 110991
| ||||| || | ||||| || || ||||
Sbjct 179811 GATGAGTTCGAGGCTCTTTATGAGAAGTATG 179781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186806854438751
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |