Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq246 93.3 4e-14 >seq246 Length=239075 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | |||||| || | | ||||| || ||||| ||||| || | ||| Sbjct 189652 ACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAAAGGGT 189711 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || || ||||| || |||| ||||||| ||||| || |||||||| ||||| Sbjct 189712 ACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATGCC 189771 Query 132022 TTCTTTATC-GGTAATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCG 132079 ||||||||| ||| |||| | | ||| | || | ||||||| | |||||| || Sbjct 189772 TTCTTTATCTTGTA--TTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCACCTCT 189829 Query 132080 ACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | || ||||| || |||||||| Sbjct 189830 AGGGTGATGGTCTTACCGGTGAGAGTTTT 189858 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || || |||||||| | || || ||| |||||||||||||| | | | Sbjct 189226 CTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCGAGCTGTTTACCAGCAAA 189285 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||||||||| || ||||| || || || ||||| ||||| ||||| ||| | | Sbjct 189286 GATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGGATTTTAGATTTAACATT 189345 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | ||||||| ||| ||||| | ||| | ||||| || ||||| ||||| | Sbjct 189346 ATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTTGCCGGTCAGGGTTTTAAC 189405 Query 132112 GAAAATCTGCATG 132124 ||| || |||||| Sbjct 189406 GAAGATTTGCATG 189418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608870562760