Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq326 107 3e-17 seq279 102 1e-15 seq357 100 4e-15 >seq326 Length=563541 Score = 107 bits (118), Expect = 3e-17 Identities = 209/304 (69%), Gaps = 15/304 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| | ||||| || ||||||||||| || || || || | Sbjct 320695 GATCTGGCAAATGTACAAGAAAG-CAGAGGCATCGTTTTGGACCGCAGAAGAAGTTGATC 320637 Query 1455835 TCGGCGCCGACACGGTCCAC-TGGGTGTCGC-------TGAGCGACGACGAGCGCCATTT 1455886 || ||| | | || | || || | ||| || |||||||| | || Sbjct 320636 TCT----CGAAA-GATCTTCATGACTGGAACAATAGATTGAATGATGACGAGCGATACTT 320582 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| |||||| | || || || |||||| ||||| || || |||||||| | Sbjct 320581 CATCTCACACGTCTTGGCATTCTT-CGCCGCGTCGGATGGAATTGTCAATGAGAACCTCG 320523 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 || || || | ||| ||||| | || ||||| || | || ||||| ||||||| Sbjct 320522 TCGAGCGTTTCAGCGGAGAAGTCCAGGTCCCTGAGGCCCGATGCTTCTACGGTTTCCAGA 320463 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || || |||||||||||||| ||||| ||||| || || ||||| || || |||||| Sbjct 320462 TCATGATGGAAAACATCCACTCCGAAACTTACTCCCTTCTCATCGATACGTATATCAAGG 320403 Query 1456067 ACCC 1456070 | || Sbjct 320402 AACC 320399 >seq279 Length=233879 Score = 102 bits (112), Expect = 1e-15 Identities = 198/290 (68%), Gaps = 2/290 (1%) Strand=Plus/Minus Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 ||||||||| ||| ||||| ||| || | || || ||||| || || || || || | Sbjct 180328 CATGTCGCAAAAGTACTTCAC-TCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCCC 180270 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || |||| | |||||||| || | || ||||||| || ||||||||||| | Sbjct 180269 AGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATTT 180210 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||||| || || || || || || || ||| | ||||| || || ||| || | Sbjct 180209 ATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAACA 180150 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 ||| | || | | || ||||| | || || || || ||| || ||||| Sbjct 180149 TTCACCGCATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGGAA 180090 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 |||| || ||||| |||||||| || |||| || | |||||||||||| Sbjct 180089 TTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAG 180040 >seq357 Length=150078 Score = 100 bits (110), Expect = 4e-15 Identities = 117/154 (76%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 332848 GATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTC 332907 |||||||||||| ||||||||| || |||||||||||||||| ||| ||||||| || Sbjct 100140 GATTTGGGCGTCCGTGAGGCGCGCATAGCGCAGGATGGCACAGCGGGATTGCAGGGGTTC 100081 Query 332908 GATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTC 332967 ||||| | |||| |||||||| | || || || || || ||| || | || Sbjct 100080 GATGATTTTATTCGACTGATTGCAGGCGAATGCGAAGCGGGTGGTTGTGGAATATATCTC 100021 Query 332968 CATGG-TCGACCGGAGGGCCTGTTGGGCCGCCGG 333000 ||||| |||| |||||||| || |||| |||||| Sbjct 100020 CATGGTTCGA-CGGAGGGCTTGCTGGG-CGCCGG 99989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177773487331342