Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq279 241 2e-58
seq326 123 3e-23
>seq279
Length=233879
Score = 241 bits (266), Expect = 2e-58
Identities = 596/898 (66%), Gaps = 10/898 (1%)
Strand=Plus/Plus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
||||| ||||| || | ||||| |||| || || |||||||||||| | || | |
Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| || ||| | || ||| ||||||||||||||||| || ||||||| || | ||
Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| | | | | |||||| || || ||||| ||||| | || || | |
Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
||||| ||||||||| || || || || || | |||| || || || || ||||||
Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
|| || | |||||||||||||||||| | || | ||||| |||| ||| || || ||
Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876
||||| ||||||| ||| || || | | || || ||| |||||
Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160
Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936
|| || || || | || || |||||||||||| ||||| |||||||| || |||||
Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220
Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996
||||| || || |||| | || || || || | ||| ||| | || ||| ||
Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280
Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056
|| || || | |||||||| || |||||||| | |||| || | || || |||||
Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340
Query 70057 TCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
||||| || ||| | || | | | || || || || || |||||||| | ||| ||
Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCG-TGGATCCCAATAGCAACACGCATAATCATGTG 180399
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
||| || || ||| | || ||| ||| | || ||| || | ||||| || ||
Sbjct 180400 CTGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTT 180459
Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235
|| || ||||| | ||| ||||| | ||||||| |||| | || || | | |||
Sbjct 180460 GAATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATC 180519
Query 70236 CTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGG---AGATCGTTTACC 70292
| || | | | || || || | | |||| || || || || ||| ||
Sbjct 180520 CGCATGTCTCATTACGATTTCGTACGTACTCTGTGATATCATGGGGGCAGGACGT---CC 180576
Query 70293 ATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtttttttG 70351
|| || ||||| |||| | | | ||| || || || || | ||| | || || |
Sbjct 180577 GTTCTTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGG 180635
Query 70352 TTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
||| |||||| | || |||| || || | || |||||||| || ||||| |||||
Sbjct 180636 TTTGCTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693
Score = 122 bits (134), Expect = 1e-22
Identities = 699/1105 (63%), Gaps = 25/1105 (2%)
Strand=Plus/Plus
Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426
||||| || ||||| || || | || |||| ||||||| ||||| ||||| || ||
Sbjct 178582 ATCCACAGTGAACTGGATTGGAGCAGACGCGGCCATTGTACGGAGATAATACATGCCAGT 178641
Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486
|||| || || |||| ||| ||| ||||| || || | || | || ||
Sbjct 178642 CTTCAAGCCGAGTTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTACCCATGGTGGGCTC 178701
Query 68487 GGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCAT 68546
| |||||||| | |||||| ||| |||||||| || |||| ||| || |||||
Sbjct 178702 CTTCAAGTGAATATTGAGAGATTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCAT 178761
Query 68547 TTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATC 68606
| | ||| | |||| |||||||| | || || ||| ||||||||| |
Sbjct 178762 CTGAACAATGGTTCGCTGAGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTG 178821
Query 68607 TGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663
||| | | | | ||||| ||||| || ||||| | |||||| |||||| || |
Sbjct 178822 TGGGATATTGGGAATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTT 178881
Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723
|| ||| | ||| | | | | || ||| || || ||||| ||
Sbjct 178882 GTCGGACCAGAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAA 178941
Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783
|| || | | || | || | ||| |||||| ||| || ||||| | |||| ||
Sbjct 178942 CTCGCCTGCAAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTT 179001
Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843
||| ||||| || ||| ||||| ||||| || || || | ||||| || |
Sbjct 179002 GAATCCAAGAATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCG 179061
Query 68844 AAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTAC 68903
|| ||||| | ||| | | ||| ||| | ||||||||| ||||| | ||
Sbjct 179062 AACTCCATGCTTAGCGATCTCCTGTTTCAGAGAATCCCAATCCCAGAGATCGGTGGGAGT 179121
Query 68904 AACATTCCAAAGATCGTATTGTAGAATTCC--GTTACT-TGCATATGATCCATTATATGT 68960
||| ||| | ||| || || || || || || | || | || || | |||||
Sbjct 179122 GACACCCCACATATCATACTGAAGGATGCCCTGTGAGACTGGA---GAACCTTCATATGA 179178
Query 68961 TTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC-TCTAATGCAC-CGTAATAA 69018
||| || || || | |||||| ||||| || || || || ||| |||
Sbjct 179179 GGAATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAA--CAGGCGTGGTAA 179236
Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATG 69077
|||||||| ||||| | |||| | | |||| ||||| | ||| |||||| |
Sbjct 179237 ATTGTTTCAAAAATTTGAATATTCAACTGCTTG-GCTTCAGGGGAATCAAATGGAAGTCG 179295
Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137
||| | || ||||| || | |||||||| || | || || | ||| |
Sbjct 179296 CAAAGCGAGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAA 179355
Query 69138 ATTTGAACTTTCAGCTTC-TGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196
|| | || ||||| | || | ||||| || || || || ||| | ||||| |
Sbjct 179356 GTTGCTTCGTTTGGCTTCCTCGACT-GGATAGTAGTTTCGGTCGATGATTCTGTTAAGGT 179414
Query 69197 TTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAA 69256
| || || || |||| | || || | || ||| ||||||| || |||| | |
Sbjct 179415 TGCGAACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAG 179474
Query 69257 CAAACA------TATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310
|| || || | || | || || | |||||||| || || |||| || |
Sbjct 179475 CATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGG-T 179533
Query 69311 TTGCA-TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369
||| |||| || ||||| || |||||||| | | | ||||||||||| || |
Sbjct 179534 GAGCAGTATTCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTT 179593
Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429
|| || ||||| ||||| || || |||||||| || ||||| || ||||||| ||| |
Sbjct 179594 TGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTT 179653
Query 69430 TGAGATTCGATAATAGATTTCCAAA 69454
|||| |||| ||||| | |||||
Sbjct 179654 TGAGCCTCGAGAATAGCATACCAAA 179678
>seq326
Length=563541
Score = 123 bits (136), Expect = 3e-23
Identities = 183/259 (71%), Gaps = 3/259 (1%)
Strand=Plus/Plus
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
|||| || ||||||||||| ||| ||||| || ||||| || |||| || |||| |
Sbjct 320436 TTTCGGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGA 320495
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|| || ||| | || | || | | || ||||| || |||||||| ||||
Sbjct 320496 CCTGGACTTCTCCGCTGAAACGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGG 320555
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT---CC 40088
| || |||||||| || ||| || || ||| || || ||||| |||| ||
Sbjct 320556 CGAAGAATGCCAAGACGTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCC 320615
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||||| | |||||| || | ||| |||||||| || ||||||||||| |||||||| |
Sbjct 320616 AGTCATGAAGATCTTTCGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTT 320675
Query 40149 TTTTGTACATGTTCCATAT 40167
| |||||||| | ||| ||
Sbjct 320676 TCTTGTACATTTGCCAGAT 320694
Score = 111 bits (122), Expect = 2e-19
Identities = 301/460 (65%), Gaps = 8/460 (2%)
Strand=Plus/Plus
Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369
|| |||||| || || ||||| |||||||| || ||||| || || ||||| || ||
Sbjct 319776 TGCCATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCC 319835
Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429
|| || || || ||||||||||| || || || || | || || ||| |||
Sbjct 319836 AGTCAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATT 319895
Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489
|| | | | | || ||| |||||||| || |||||| ||| | |
Sbjct 319896 GCCCAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGC 319955
Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549
|||||||| | ||| ||| ||||| || || || ||||| | |||||| | ||
Sbjct 319956 GTTCATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGAC 320015
Query 39550 GGCCTCTGTTATTATCGATGTT----ACTACCTCATCACTCGGTGGATGCAATAAATGTT 39605
|| ||||| || ||| || || |||| || || | || | ||
Sbjct 320016 AGCTTCTGTGAT----GATTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAG 320071
Query 39606 TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAG 39665
|| | | ||||||||||||| |||| |||||||| | | || | || || |
Sbjct 320072 AGAAGAGAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGG 320131
Query 39666 AAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATC 39725
|||| || || || ||||| || |||||||| || ||||| || || | ||||| ||||
Sbjct 320132 AAAAGGTAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATC 320191
Query 39726 CAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| |||||||| ||||| || || ||||| || || ||
Sbjct 320192 CACTGAAGAAGATACCTTCGACAGCAGCAAAGGCGACGAG 320231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686905442733240
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