Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq279 241 2e-58 seq326 123 3e-23 >seq279 Length=233879 Score = 241 bits (266), Expect = 2e-58 Identities = 596/898 (66%), Gaps = 10/898 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| ||||| || | ||||| |||| || || |||||||||||| | || | | Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || ||| | || ||| ||||||||||||||||| || ||||||| || | || Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | | | | |||||| || || ||||| ||||| | || || | | Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| ||||||||| || || || || || | |||| || || || || |||||| Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | |||||||||||||||||| | || | ||||| |||| ||| || || || Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||| ||||||| ||| || || | | || || ||| ||||| Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || || |||||||||||| ||||| |||||||| || ||||| Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||||| || || |||| | || || || || | ||| ||| | || ||| || Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || | |||||||| || |||||||| | |||| || | || || ||||| Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340 Query 70057 TCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 ||||| || ||| | || | | | || || || || || |||||||| | ||| || Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCG-TGGATCCCAATAGCAACACGCATAATCATGTG 180399 Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175 ||| || || ||| | || ||| ||| | || ||| || | ||||| || || Sbjct 180400 CTGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTT 180459 Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 || || ||||| | ||| ||||| | ||||||| |||| | || || | | ||| Sbjct 180460 GAATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATC 180519 Query 70236 CTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGG---AGATCGTTTACC 70292 | || | | | || || || | | |||| || || || || ||| || Sbjct 180520 CGCATGTCTCATTACGATTTCGTACGTACTCTGTGATATCATGGGGGCAGGACGT---CC 180576 Query 70293 ATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtttttttG 70351 || || ||||| |||| | | | ||| || || || || | ||| | || || | Sbjct 180577 GTTCTTGGGATTGTGGTAGTGGTACAGATCATCTATCAC-GGACGAGAATTGCTTCTTGG 180635 Query 70352 TTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 ||| |||||| | || |||| || || | || |||||||| || ||||| ||||| Sbjct 180636 TTTGCTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693 Score = 122 bits (134), Expect = 1e-22 Identities = 699/1105 (63%), Gaps = 25/1105 (2%) Strand=Plus/Plus Query 68367 ATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGT 68426 ||||| || ||||| || || | || |||| ||||||| ||||| ||||| || || Sbjct 178582 ATCCACAGTGAACTGGATTGGAGCAGACGCGGCCATTGTACGGAGATAATACATGCCAGT 178641 Query 68427 TTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATC 68486 |||| || || |||| ||| ||| ||||| || || | || | || || Sbjct 178642 CTTCAAGCCGAGTTTCCAGCCGGTGAAGTGCATGCTGGTAATCTTACCCATGGTGGGCTC 178701 Query 68487 GGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCAT 68546 | |||||||| | |||||| ||| |||||||| || |||| ||| || ||||| Sbjct 178702 CTTCAAGTGAATATTGAGAGATTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCAT 178761 Query 68547 TTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATC 68606 | | ||| | |||| |||||||| | || || ||| ||||||||| | Sbjct 178762 CTGAACAATGGTTCGCTGAGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTG 178821 Query 68607 TGGAAGGCTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTC 68663 ||| | | | | ||||| ||||| || ||||| | |||||| |||||| || | Sbjct 178822 TGGGATATTGGGAATGTTTTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTT 178881 Query 68664 ATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAA 68723 || ||| | ||| | | | | || ||| || || ||||| || Sbjct 178882 GTCGGACCAGAGACCCAAGTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAA 178941 Query 68724 TTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 68783 || || | | || | || | ||| |||||| ||| || ||||| | |||| || Sbjct 178942 CTCGCCTGCAAGGACACGGCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTT 179001 Query 68784 ATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 68843 ||| ||||| || ||| ||||| ||||| || || || | ||||| || | Sbjct 179002 GAATCCAAGAATCTGGCTAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCG 179061 Query 68844 AAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTAC 68903 || ||||| | ||| | | ||| ||| | ||||||||| ||||| | || Sbjct 179062 AACTCCATGCTTAGCGATCTCCTGTTTCAGAGAATCCCAATCCCAGAGATCGGTGGGAGT 179121 Query 68904 AACATTCCAAAGATCGTATTGTAGAATTCC--GTTACT-TGCATATGATCCATTATATGT 68960 ||| ||| | ||| || || || || || || | || | || || | ||||| Sbjct 179122 GACACCCCACATATCATACTGAAGGATGCCCTGTGAGACTGGA---GAACCTTCATATGA 179178 Query 68961 TTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC-TCTAATGCAC-CGTAATAA 69018 ||| || || || | |||||| ||||| || || || || ||| ||| Sbjct 179179 GGAATATGGGCCGTCAACCTTAGCTAGCTCACAGGACGCAGTCAAA--CAGGCGTGGTAA 179236 Query 69019 ATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATG 69077 |||||||| ||||| | |||| | | |||| ||||| | ||| |||||| | Sbjct 179237 ATTGTTTCAAAAATTTGAATATTCAACTGCTTG-GCTTCAGGGGAATCAAATGGAAGTCG 179295 Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 ||| | || ||||| || | |||||||| || | || || | ||| | Sbjct 179296 CAAAGCGAGGAAAGCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAA 179355 Query 69138 ATTTGAACTTTCAGCTTC-TGGAATAGGATAATAATTAATATCTATAATTTTATTAAGAT 69196 || | || ||||| | || | ||||| || || || || ||| | ||||| | Sbjct 179356 GTTGCTTCGTTTGGCTTCCTCGACT-GGATAGTAGTTTCGGTCGATGATTCTGTTAAGGT 179414 Query 69197 TTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATAA 69256 | || || || |||| | || || | || ||| ||||||| || |||| | | Sbjct 179415 TGCGAACGACGACTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAG 179474 Query 69257 CAAACA------TATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAAT 69310 || || || | || | || || | |||||||| || || |||| || | Sbjct 179475 CATCCACGAAGGTAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGG-T 179533 Query 69311 TTGCA-TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGC 69369 ||| |||| || ||||| || |||||||| | | | ||||||||||| || | Sbjct 179534 GAGCAGTATTCGATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTT 179593 Query 69370 TGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATC 69429 || || ||||| ||||| || || |||||||| || ||||| || ||||||| ||| | Sbjct 179594 TGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTT 179653 Query 69430 TGAGATTCGATAATAGATTTCCAAA 69454 |||| |||| ||||| | ||||| Sbjct 179654 TGAGCCTCGAGAATAGCATACCAAA 179678 >seq326 Length=563541 Score = 123 bits (136), Expect = 3e-23 Identities = 183/259 (71%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| || ||||||||||| ||| ||||| || ||||| || |||| || |||| | Sbjct 320436 TTTCGGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGA 320495 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 || || ||| | || | || | | || ||||| || |||||||| |||| Sbjct 320496 CCTGGACTTCTCCGCTGAAACGCTCGACGAGGTTCTCATTGACAATTCCATCCGACGCGG 320555 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT---CC 40088 | || |||||||| || ||| || || ||| || || ||||| |||| || Sbjct 320556 CGAAGAATGCCAAGACGTGTGAGATGAAGTATCGCTCGTCATCATTCAATCTATTGTTCC 320615 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||||| | |||||| || | ||| |||||||| || ||||||||||| |||||||| | Sbjct 320616 AGTCATGAAGATCTTTCGAGAGATCAACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTT 320675 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | ||| || Sbjct 320676 TCTTGTACATTTGCCAGAT 320694 Score = 111 bits (122), Expect = 2e-19 Identities = 301/460 (65%), Gaps = 8/460 (2%) Strand=Plus/Plus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || |||||| || || ||||| |||||||| || ||||| || || ||||| || || Sbjct 319776 TGCCATAACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCC 319835 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 || || || || ||||||||||| || || || || | || || ||| ||| Sbjct 319836 AGTCAGCGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATT 319895 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 || | | | | || ||| |||||||| || |||||| ||| | | Sbjct 319896 GCCCAGAGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGC 319955 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 |||||||| | ||| ||| ||||| || || || ||||| | |||||| | || Sbjct 319956 GTTCATTCCGAGAAGTGCGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGAC 320015 Query 39550 GGCCTCTGTTATTATCGATGTT----ACTACCTCATCACTCGGTGGATGCAATAAATGTT 39605 || ||||| || ||| || || |||| || || | || | || Sbjct 320016 AGCTTCTGTGAT----GATTTTCTGAACAGCCTCTGGGCTGGGGCGGTGGCGCAGGTGAG 320071 Query 39606 TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAG 39665 || | | ||||||||||||| |||| |||||||| | | || | || || | Sbjct 320072 AGAAGAGAAGGCAGGCGAAGTCAGTGTGTAAACCCTCATCACGAGAGATAAGCTCATTGG 320131 Query 39666 AAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATC 39725 |||| || || || ||||| || |||||||| || ||||| || || | ||||| |||| Sbjct 320132 AAAAGGTAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCAAAGGATC 320191 Query 39726 CAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || |||||||| ||||| || || ||||| || || || Sbjct 320192 CACTGAAGAAGATACCTTCGACAGCAGCAAAGGCGACGAG 320231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905442733240