Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq279 154 2e-32 >seq279 Length=233879 Score = 154 bits (170), Expect = 2e-32 Identities = 627/972 (65%), Gaps = 36/972 (4%) Strand=Plus/Plus Query 117938 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 117997 ||| ||||| ||||||||| || ||||| || ||||| | || || || ||| || Sbjct 178723 TTGAGATTGGTCGATGAAGGCACCTCGATCGGCAGCCATCTGAA-CA-ATGGTTCG-CTG 178779 Query 117998 ---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATT 118054 ||||||||| || || |||| || || ||||| | |||||||| || || Sbjct 178780 AGAGATTTCCCAGACGGTTTTGTAAAGTGCTTTGATATCCTGTGGGATATTGGGAATGTT 178839 Query 118055 TTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAAT 118114 ||||||||| || || | | || ||| |||||| | | ||||||||||| | Sbjct 178840 TTGGATGGAGCCTCCATCTGCAATAATTCGATTCTTCATGTTGTCGGACCAGAGACCCAA 178899 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCG 118174 | || |||| || || | ||||||| ||||| || || ||| || Sbjct 178900 GTCCACCAGGTCCTTCAAAAGCCACGGGTTGACAATTTGGAACTCGCCTGCAAGGACACG 178959 Query 118175 TCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGC 118234 | | |||||||| | ||||| || || ||||| || ||| | |||||| | ||| Sbjct 178960 GCGCGAGTAGATATTAGAGGTGTAAGGTTCGAAGCATTCGTTGA-ATCCAAGAATCTGGC 179018 Query 118235 T-GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAA 118293 | ||| ||| || |||||||| || | || | ||||| || | || | | || Sbjct 179019 TAGTGCTGGCAGTAGGCATGGGAGCAACAAGCAAACTGTTGCGAACTCCATGCT---TAG 179075 Query 118294 TGCGTTCCT---TGAGAGCGTCCCAGTCGTAGTTGAGCTTTG----TCTCCCCCTGCCAC 118346 | |||| | |||| ||||| || || || | || | | ||| ||| Sbjct 179076 CGATCTCCTGTTTCAGAGAATCCCAATCCCAGA-GATCGGTGGGAGTGACACCC---CAC 179131 Query 118347 ATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCC 118406 |||||| |||| ||||| || || || |||| || || ||| ||| ||||||||| Sbjct 179132 ATATCATACTGAAGGATGCCCTGTGAGACTGGAGAACCTTCATATGAGGAATATGGGCCG 179191 Query 118407 TCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATG 118466 ||||||| || | || || ||| | ||||| || |||||||||||||| Sbjct 179192 TCAACCTTAGCTAGCTCACAGGACGCAGTCAAACAGGCGTGGTAAATTGTTTCAAAAATT 179251 Query 118467 CGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA---ATAAAT 118523 || ||||| |||||| || ||||||||| | ||||| |||| | || Sbjct 179252 TGAATATTCAACTGCTTGGCTTCAGGGGAATCAAATGGAAGTCG---CAAAGCGAGGAAA 179308 Query 118524 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC--C 118581 |||| || ||||| || |||||| | ||||||||||||| | | || |||| Sbjct 179309 GCATCAGCAAGACCCTGAACACCGCAGGCAATTGGGCGATGGCGGAAGTT--GCTTCGTT 179366 Query 118582 GAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAA 118641 || ||| || ||||| | || | ||||| | || || || || ||| | Sbjct 179367 TGGCTTCCTCGACTGGATAGTAGTTTCGGTCGATGATTCTGTTAAGGTTGCGAACGACGA 179426 Query 118642 CCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACT 118701 | | || | ||| || ||||| | ||||| | | | | | ||| || | Sbjct 179427 CTTGAGTTACTTCGTGGAGCTTGCCAAAATCATATTCTCCACGCACAGCATCCACGAAGG 179486 Query 118702 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTC 118759 |||| | ||| || || |||| ||||| |||| ||||| | | || ||| || Sbjct 179487 TAGGTAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCAGGTGAGCA--GTATTC 179544 Query 118760 TATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTT 118819 || || || ||||| | || || || |||| || |||| ||||||||| || ||| Sbjct 179545 GATGATCTCGGTGCATAGATTGGAGCTTCTAATAGTCCCCAGGTTCTTTTGGTTGCTCTT 179604 Query 118820 TGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAG 118879 |||| || ||||||||||| ||||| | || | || ||||| ||||| | || ||| Sbjct 179605 CTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTTTGAGCCTCGAG 179664 Query 118880 AATAGCCTTCCA 118891 |||||| | ||| Sbjct 179665 AATAGCATACCA 179676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432177397960