Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq279 154 2e-32 seq326 102 9e-17 >seq279 Length=233879 Score = 154 bits (170), Expect = 2e-32 Identities = 389/589 (66%), Gaps = 2/589 (0%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || | || ||||| || || ||| | ||||| |||||||| || Sbjct 180390 ATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGTCATTGAGACATATAAC 180331 Query 19178 CTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAAC 19237 || ||| || |||| |||||| || || | || ||||| |||||||| ||||| | Sbjct 180330 CTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCC 180271 Query 19238 AACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATC 19297 | || |||||| | || ||||| | | ||||||||| |||||||| |||||||| Sbjct 180270 CAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATT 180211 Query 19298 TACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC 19357 || || || || || || || | || || ||| |||| ||||| || | || Sbjct 180210 TATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAAC 180151 Query 19358 -TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | | ||||| | |||| | || ||| ||||| || | |||| Sbjct 180150 ATTCACCGC-ATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGG 180092 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 || || || ||||||||||| ||||| ||||| ||||| |||||| ||||||| || Sbjct 180091 AATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAGGGAGGTAA 180032 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| ||| || |||| ||||||||||| ||||||||||| ||| | | || || Sbjct 180031 CAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGCATATGGATATTTTTGAATT 179972 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 | | || || || ||||| || | || || | || ||| || || ||| || Sbjct 179971 CTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCGTGCTCGTGATCTATTCCTTGC 179912 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656 | |||| || || ||||| ||| | ||||||||| | | |||||| ||| | Sbjct 179911 ACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGAATGGTGAATGGACTCTGTT 179852 Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 || || | ||| || ||| | | || ||||| || || | |||| Sbjct 179851 CTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGTGATGAGTTC 179803 Score = 143 bits (158), Expect = 3e-29 Identities = 394/600 (66%), Gaps = 3/600 (1%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||||||||| | || ||| || || | || || | ||| ||| || | Sbjct 179810 TCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTCCATTCACCA 179869 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||||||||| | ||| || || || || |||| || || ||| || || || Sbjct 179870 TTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAATAGATCACGA 179929 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | || || | ||| ||||| || || || | || || | || || Sbjct 179930 GCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAAATATCCATA 179989 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || |||||||| |||| || ||||||| || ||||||| |||| Sbjct 179990 TGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCCTGGTCGACG 180049 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 || | ||| ||||| |||||||| |||||||| || || || |||| | ||| ||| Sbjct 180050 TATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAAGAGCCATTC 180109 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCC 79664 || || || | ||| | | || ||| | | | || | || || || || Sbjct 180110 GTTCCAGCAATGTAGGAACCAGTACCACGGATG-CGGTGAATGTTAAGACCAATACCACC 180168 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 || ||| || || | || || || || || || || ||||||||||| ||| Sbjct 180169 GGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCGATGCTGTC 180228 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| | | |||||||| | |||||| || | | ||||| |||||||| Sbjct 180229 TTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCAGCGTTGAA 180288 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 |||||| || | || || |||||| ||||||| ||| || | || ||||| |||| Sbjct 180289 GAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTCTCAATGAC 180348 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCG 79903 | | ||| || |||||||| || | || || ||||| | | || ||| ||||| Sbjct 180349 TCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGCTGTGGGCG 180408 >seq326 Length=563541 Score = 102 bits (112), Expect = 9e-17 Identities = 111/142 (78%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTT 60031 |||||||| |||||| | || ||||| ||| || ||||| ||||||||| ||| || || Sbjct 320243 TTTGCACAGCGTCTCGTCGCCTTTGC-TGCTGTCGAAGGTATCTTCTTCAGTGGATCCTT 320185 Query 60032 CTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACG 60090 || | | || |||||||| || ||||||||||| ||||| ||||| | || ||||| | Sbjct 320184 -TGCGTCAATCTTCTGGCTGAAGAAGCGTGGCCTTATGCCAGGCCTTACCTTTTCCAATG 320126 Query 60091 AGCTGATTTCCCGGGACGAGGG 60112 |||| || || || || ||||| Sbjct 320125 AGCTTATCTCTCGTGATGAGGG 320104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522119085040