Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq279 159 4e-34
seq326 114 1e-20
seq378 93.3 5e-14
>seq279
Length=233879
Score = 159 bits (176), Expect = 4e-34
Identities = 392/589 (67%), Gaps = 4/589 (1%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| || || | || |||||||| || ||| | ||| |||||| || ||
Sbjct 180390 ATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGTCATTGAGACATATAAC 180331
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
| ||| ||||||||||| || || ||| | || ||||| ||||||||||||||
Sbjct 180330 CTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCC 180271
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| ||||||||| | |||||||| | | |||||||| ||| ||||| |||||
Sbjct 180270 CAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATT 180211
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
|| || || || || ||||| | || || ||| | |||||||| ||| | ||
Sbjct 180210 TATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAAC 180151
Query 53435 -TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493
| | | | |||||| | || | || || ||||| ||| | | ||
Sbjct 180150 ATTCACCG-CATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGG 180092
Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553
||| || |||||||||||||| ||||| ||||| ||| | |||||| ||||||| |||
Sbjct 180091 AATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAGGGAGGTAA 180032
Query 53554 GAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTT 53613
|||||| || |||| ||||||||||| ||||| ||||| || ||| | || ||
Sbjct 180031 CAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGCATATGGATATTTTTGAATT 179972
Query 53614 TCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAG 53672
| || || || || || || | ||||| | || ||| ||||| || || |
Sbjct 179971 CTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCG-TGCTCGTGATCTATTCCTTG 179913
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
| || |||| || || || || ||| || || |||||| | | || ||| |||
Sbjct 179912 CACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGAATGGTGAATGGACTCTGT 179853
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
| || || || || || ||| | || |||||| ||||| |||||
Sbjct 179852 TCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGTGATGAGTT 179804
>seq326
Length=563541
Score = 114 bits (126), Expect = 1e-20
Identities = 99/120 (83%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGA-TGGCACA 74848
||||| ||||| | |||||| |||||||| ||||||||||||| ||| |||| || | ||
Sbjct 320125 TCATTGGAAAAGGTAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA 320184
Query 74849 GAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
||||| |||||||||||||| ||||||||| ||||||||||| || || || || ||
Sbjct 320185 -AAGGATCCACTGAAGAAGATACCTTCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAA 320243
>seq378
Length=104875
Score = 93.3 bits (102), Expect = 5e-14
Identities = 199/292 (68%), Gaps = 4/292 (1%)
Strand=Plus/Plus
Query 152779 AAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAG 152838
|| |||||||| || |||||| |||| || ||||||||||| ||| | || |||
Sbjct 41581 AAACCCTTGATATGGCTACCGTCATGATCTTGATCAGTCATGATCATAAGATGCCCATAG 41640
Query 152839 CGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGATCTTTTTGAG 152897
|| ||| | | | ||| | ||| ||||| || || || || |||| |||||||
Sbjct 41641 CGGAGG-CCCTTCGTGTCAGTGTACTCCTTTTTGTGCTGTAGTCCAAGGAAGTTTTTGAT 41699
Query 152898 GTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGG 152957
||| | |||| |||| | || | ||| | || | ||| ||||| || ||| ||
Sbjct 41700 GTTCTGGATTTCCGCATTTTTGGATATCTGATCGACAGAGGCGTCCCGGACGTTGAGCAT 41759
Query 152958 CTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTAC-AACGCTCAGACCGGCAA 153016
|||||| || || || |||||||| || | | || || | |||| ||||||| |
Sbjct 41760 CTTTCCTCGAAGGGGGAACACGCCAAATAGATCAGGTCCAACTATTGCTC-GACCGGCCA 41818
Query 153017 TAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTG 153068
|||| | | || || || || ||||| || | ||| || ||||||| |||
Sbjct 41819 TAGCCAATCCCTTTGCGGAATCTCCCTCAGTAAGAATGAGAGTACAGTGGTG 41870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213325481800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |