Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq279 159 4e-34 seq326 114 1e-20 seq378 93.3 5e-14 >seq279 Length=233879 Score = 159 bits (176), Expect = 4e-34 Identities = 392/589 (67%), Gaps = 4/589 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || || | || |||||||| || ||| | ||| |||||| || || Sbjct 180390 ATGCGTGTTGCTATTGGGATCCACGGAGATGACGTGGAAAGAGTCATTGAGACATATAAC 180331 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| ||||||||||| || || ||| | || ||||| |||||||||||||| Sbjct 180330 CTCATGTCGCAAAAGTACTTCACTCATGCCTCTCCTACCCTCTTCAACGCTGGTACTCCC 180271 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || ||||||||| | |||||||| | | |||||||| ||| ||||| ||||| Sbjct 180270 CAGCCTCAGATGGCCTCGTGCTTCCTCATTGATATGAAGGAAGACAGCATCGAGGGCATT 180211 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 || || || || || ||||| | || || ||| | |||||||| ||| | || Sbjct 180210 TATGACACCCTGAAAACTTGTGCTCTAATTTCAAAGACCGCCGGTGGTATTGGTCTTAAC 180151 Query 53435 -TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493 | | | | |||||| | || | || || ||||| ||| | | || Sbjct 180150 ATTCACCG-CATCCGTGGTACTGGTTCCTACATTGCTGGAACGAATGGCTCTTCAAACGG 180092 Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553 ||| || |||||||||||||| ||||| ||||| ||| | |||||| ||||||| ||| Sbjct 180091 AATTGTTCCTATGCTCCGCGTTTTCAATAACACTGCCAGATACGTCGACCAGGGAGGTAA 180032 Query 53554 GAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTT 53613 |||||| || |||| ||||||||||| ||||| ||||| || ||| | || || Sbjct 180031 CAAGCGCCCAGGAGCGTTTGCCATCTACCTTGAGCCATGGCATATGGATATTTTTGAATT 179972 Query 53614 TCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAG 53672 | || || || || || || | ||||| | || ||| ||||| || || | Sbjct 179971 CTTGGATCTCCGGAAAAACCACGGCAAGGAAGAAGTTCG-TGCTCGTGATCTATTCCTTG 179913 Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732 | || |||| || || || || ||| || || |||||| | | || ||| ||| Sbjct 179912 CACTTTGGACACCTGATCTATTTATGAAACGCGTTGAGAAGAATGGTGAATGGACTCTGT 179853 Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 | || || || || || ||| | || |||||| ||||| ||||| Sbjct 179852 TCTGTCCAAATGAAGCACCAGGCTTGGCGGATGTCTATGGTGATGAGTT 179804 >seq326 Length=563541 Score = 114 bits (126), Expect = 1e-20 Identities = 99/120 (83%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGA-TGGCACA 74848 ||||| ||||| | |||||| |||||||| ||||||||||||| ||| |||| || | || Sbjct 320125 TCATTGGAAAAGGTAAGGCCTGGCATAAGGCCACGCTTCTTCAGCCAGAAGATTGACGCA 320184 Query 74849 GAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 ||||| |||||||||||||| ||||||||| ||||||||||| || || || || || Sbjct 320185 -AAGGATCCACTGAAGAAGATACCTTCGACAGCAGCAAAGGCGACGAGACGCTGTGCAAA 320243 >seq378 Length=104875 Score = 93.3 bits (102), Expect = 5e-14 Identities = 199/292 (68%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 152779 AAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAG 152838 || |||||||| || |||||| |||| || ||||||||||| ||| | || ||| Sbjct 41581 AAACCCTTGATATGGCTACCGTCATGATCTTGATCAGTCATGATCATAAGATGCCCATAG 41640 Query 152839 CGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGATCTTTTTGAG 152897 || ||| | | | ||| | ||| ||||| || || || || |||| ||||||| Sbjct 41641 CGGAGG-CCCTTCGTGTCAGTGTACTCCTTTTTGTGCTGTAGTCCAAGGAAGTTTTTGAT 41699 Query 152898 GTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGG 152957 ||| | |||| |||| | || | ||| | || | ||| ||||| || ||| || Sbjct 41700 GTTCTGGATTTCCGCATTTTTGGATATCTGATCGACAGAGGCGTCCCGGACGTTGAGCAT 41759 Query 152958 CTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTAC-AACGCTCAGACCGGCAA 153016 |||||| || || || |||||||| || | | || || | |||| ||||||| | Sbjct 41760 CTTTCCTCGAAGGGGGAACACGCCAAATAGATCAGGTCCAACTATTGCTC-GACCGGCCA 41818 Query 153017 TAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCGTG 153068 |||| | | || || || || ||||| || | ||| || ||||||| ||| Sbjct 41819 TAGCCAATCCCTTTGCGGAATCTCCCTCAGTAAGAATGAGAGTACAGTGGTG 41870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213325481800