Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq246 125 4e-24 seq12 91.5 9e-14 >seq246 Length=239075 Score = 125 bits (138), Expect = 4e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| |||||||||||||||||| || || || || || ||||| || || | || || Sbjct 189209 ACCAGATGGAGAGTGCTCTCCTTCTGGATATTGTAGTCCGAAAGAGTCCGACCATCCTCG 189268 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || |||||||| ||||| |||| ||| || || ||||| || | || ||||| ||| | Sbjct 189269 AGCTGTTTACCAGCAAAGATTAGACGTTGCTGATCCGGTGGGATACCTTCCTTATCTTGG 189328 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 || ||| | |||||| || ||| || || |||||| ||||| | || || ||||| Sbjct 189329 AT-TTTAGATTTAACATTATCAATGGTATCGGAGCTCTCAACTTCAAGCGTAATAGTTTT 189387 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 ||||| | ||||| || || || |||||| Sbjct 189388 GCCGGTCAGGGTTTTAACGAAGATTTGCATG 189418 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||| |||||| ||||||||| || |||||||| || || || || Sbjct 189428 AGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATATTATAATCCGAGAGAGTACGA 189487 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||||||||| ||||| || || | ||||| || || || || | || || Sbjct 189488 CCATCCTCAAGTTGTTTTCCGGCGAAAATAAGGCGCTGCTGATCGGGGGGGATGCCTTCT 189547 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| ||||| |||||| | ||| || ||| ||||| ||||| | || Sbjct 189548 TTATCT-TGAATTTTTGATTTAACATTGTCAATCGTATCTGAACTCTCGACTTCAAGTGT 189606 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | ||||| || || || ||||| Sbjct 189607 GATGGTCTTTCCGGTCAGGGTTTTAACGAAGATTTGCAT 189645 Score = 102 bits (112), Expect = 5e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | |||||| | ||||| |||||||| |||||| |||||||||||||| || Sbjct 189954 GCCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGA 190013 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| || | || || ||||| || || | ||| || ||||| || || Sbjct 190014 AAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGG 190073 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| ||| ||| | || || || ||||| || | ||| | Sbjct 190074 AATCCCTTCCTTGTC-CTGAATTTTGGACTTGACACTATCGATTGTATCAACCGACTCAA 190132 Query 34658 CTTCCACGGTTATCGTTTTACCGGT 34682 |||| | |||||| || || ||||| Sbjct 190133 CTTCGAGGGTTATAGTCTTTCCGGT 190157 >seq12 Length=85050 Score = 91.5 bits (100), Expect = 9e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||||| || | ||||| || |||||| |||||||| || || || Sbjct 76212 CCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAG 76153 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || ||||||||||| || || | ||| || ||||| || || Sbjct 76152 AGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGAGGG 76093 Query 34600 ACTCCCTCCTTGTCTGTG 34617 | ||||||||||||| || Sbjct 76092 ATTCCCTCCTTGTCTATG 76075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728100215103