Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq246 113 3e-20 >seq246 Length=239075 Score = 113 bits (124), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || |||||||||||||| || ||||| || ||||| || ||||| || | Sbjct 189646 AATGCAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTC 189587 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| ||||| | ||||||| || |||||||| | || || |||| Sbjct 189586 AGATACGATTGACAATGTTAAATC-AAAAATTCAAGATAAAGAAGGCATCCCCCCCGATC 189528 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||||| | || || ||||| |||||||| || || | || ||| | ||||| | Sbjct 189527 AGCAGCGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATA 189468 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || ||||| |||||||| Sbjct 189467 ATATCCAAAAGGAGTCCAC 189449 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||||||||| || || ||||| || || || |||||||| | | Sbjct 189417 ATGCAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCC 189358 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| ||||| | ||||| || || |||||| | || || ||||| Sbjct 189357 GATACCATTGATAATGTTAAATC-TAAAATCCAAGATAAGGAAGGTATCCCACCGGATCA 189299 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||| |||| ||||| || ||||| || || || | || ||| | || ||||| Sbjct 189298 GCAACGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAA 189239 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||| ||| | ||| | || | || ||||| || || Sbjct 189238 TATCCAGAAGGAGAGCACTCTCCATCTGGTCCTGAGATTGCGGGGTGG 189191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007989278628