Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq326 100 2e-16
>seq326
Length=563541
Score = 100 bits (110), Expect = 2e-16
Identities = 193/283 (68%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872
||||| |||| || || || || ||| || |||| || || || ||||| || |
Sbjct 320404 CTTGA-TATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGA 320462
Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932
|||| || ||||| ||||||| || || | || || ||||| | || | || |
Sbjct 320463 TCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCGA 320522
Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992
| | ||| || || || || || || || || || || ||||| || || || || |
Sbjct 320523 CGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGA 320582
Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049
|||| | |||||| || | | || ||||||| | | |||||| | | |||||
Sbjct 320583 AGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCAA 320642
Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
||||||| | ||||||||||| || || ||||| ||||||||
Sbjct 320643 CTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACAT 320685
Score = 84.2 bits (92), Expect = 2e-11
Identities = 170/250 (68%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| || ||||| || || ||||| || ||||| ||||| || || |
Sbjct 319782 AACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCAG 319841
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366
||| || || ||||| ||||| || || || || | |||||| ||| | | ||
Sbjct 319842 CGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAG 319901
Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426
||| || || | ||| ||||| ||||| || || || |||| |||||| | | ||| ||
Sbjct 319902 AGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCAT 319961
Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485
||| | | | | || || || || | ||| | ||||| || || || | || ||||
Sbjct 319962 TCCGAGAAGTG-CGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTT 320020
Query 4486 CTGTGATTAT 4495
||||||| ||
Sbjct 320021 CTGTGATGAT 320030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047564975203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |