Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq326 100 2e-16 >seq326 Length=563541 Score = 100 bits (110), Expect = 2e-16 Identities = 193/283 (68%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| |||| || || || || ||| || |||| || || || ||||| || | Sbjct 320404 CTTGA-TATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATGA 320462 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| || ||||| ||||||| || || | || || ||||| | || | || | Sbjct 320463 TCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTCGA 320522 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | | ||| || || || || || || || || || || ||||| || || || || | Sbjct 320523 CGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGA 320582 Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 |||| | |||||| || | | || ||||||| | | |||||| | | ||||| Sbjct 320583 AGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATCAA 320642 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 ||||||| | ||||||||||| || || ||||| |||||||| Sbjct 320643 CTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACAT 320685 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/250 (68%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| || ||||| || || ||||| || ||||| ||||| || || | Sbjct 319782 AACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTAGTCTTTCCAGTCAG 319841 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAG 4366 ||| || || ||||| ||||| || || || || | |||||| ||| | | || Sbjct 319842 CGAGATGTTGTCCATGAAATCGAATGGGTTGGTAGAGTTGTAGACTTTCTTATTGCCCAG 319901 Query 4367 AGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAAT 4426 ||| || || | ||| ||||| ||||| || || || |||| |||||| | | ||| || Sbjct 319902 AGCAACGAGGAGTCGATCAGCAACAAACTCGATGTATTGGCACATGAGCTTGGCGTTCAT 319961 Query 4427 TCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 ||| | | | | || || || || | ||| | ||||| || || || | || |||| Sbjct 319962 TCCGAGAAGTG-CGCATGGGAGAGCATCTGTGAGGAACTCCTGCTCGATGGCGACAGCTT 320020 Query 4486 CTGTGATTAT 4495 ||||||| || Sbjct 320021 CTGTGATGAT 320030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047564975203