Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq279 284 2e-71
seq326 116 5e-21
>seq279
Length=233879
Score = 284 bits (314), Expect = 2e-71
Identities = 602/895 (67%), Gaps = 4/895 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| || ||||| || | ||||| |||| || || |||||| ||||| | || | |
Sbjct 179801 TCGAACTCATCACCATAGACATCCGCCAAGCCTGGTGCTTCATTTGGACAGAACAGAGTC 179860
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||||| | || ||| ||||||||||| ||||||||| |||| || |||| |||
Sbjct 179861 CATTCACCATTCTTCTCAACGCGTTTCATAAATAGATCAGGTGTCCAAAGTGCAAGGAAT 179920
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| || | | | |||||| || || || || ||||| | ||| || | |
Sbjct 179921 AGATCACGAGCACGAACTTCTTCCTTGCCGTGGTTTTTCCGGAGATCCAAGAATTCAAAA 179980
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||| ||||||||| || || || || || | | || || || || |||||||||
Sbjct 179981 ATATCCATATGCCATGGCTCAAGGTAGATGGCAAACGCTCCTGGGCGCTTGTTACCTCCC 180040
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||||||||||||||||| |||| | | ||| |||| ||| ||||| ||
Sbjct 180041 TGGTCGACGTATCTGGCAGTGTTATTGAAAACGCGGAGCATAGGAACAATTCCGTTTGAA 180100
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| ||||| ||||||| ||| || ||| |||| || ||| || ||
Sbjct 180101 GAGCCATTCGTTCCAGCAATGTAGGAACCAGTACCACGGATGCGGTGAATGTTAAGACCA 180160
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || || ||||||||||| ||||| |||||||| ||||||||
Sbjct 180161 ATACCACCGGCGGTCTTTGAAATTAGAGCACAAGTTTTCAGGGTGTCATAAATGCCCTCG 180220
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
|| || || ||| |||| | || || || || | ||| ||| | || ||| ||
Sbjct 180221 ATGCTGTCTTCCTTCATATCAATGAGGAAGCACGAGGCCATCTGAGGCTGGGGAGTACCA 180280
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
|| || || | |||||||| ||||||||||| | |||| || | || || |||||
Sbjct 180281 GCGTTGAAGAGGGTAGGAGAGGCATGAGTGAAGTACTTTTGCGACATGAGGTTATATGTC 180340
Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119
||||| ||| ||| | || | || || || | ||| |||||||| | ||| |||
Sbjct 180341 TCAATGACTCTTTCCACGTCATCTCCGTGGATCCCAATAGCAACACGCATAATCATGTGC 180400
Query 77120 TGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179
|| || || ||| || ||| ||| ||| | |||||| || | |||| || ||
Sbjct 180401 TGTGGGCGCTCTGCAACCTTGCCATTGATTCGAAGCAAGTAAGACCTCTCCAGGGTCTTG 180460
Query 77180 AAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCC 77239
|| || ||||| | ||| ||||| | ||||||| |||| | || || | | |||
Sbjct 180461 AATCCGAAATATTGGTAGTTGAAGTCGCGATCGTAAACAATAGCTGAGTTGAACTCATCC 180520
Query 77240 TTATATTTGGTAACAATATC-CATG-ACAGTGGTAGAAATAATTGGAGATCGTATTCCAT 77297
|| | | | || || || | | || || || || || || | | ||| |
Sbjct 180521 GCATGTCTCATTACGATTTCGTACGTACTCTG--TGATATCATGGGGGCAGGACGTCCGT 180578
Query 77298 TTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTT 77357
| || ||||| |||| | | || || || ||| ||| | || || ||||
Sbjct 180579 TCTTGGGATTGTGGTAGTGGTACAGATCATCTATCACGGACGAGAATTGCTTCTTGGTTT 180638
Query 77358 CCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
|||||| || || ||||| || || | ||||||||||||||| ||||| |||||
Sbjct 180639 GCTTGTGAAGGTTGGATACAGCAATCCGAGCAGCTAGAATTGCGTAGTCTGGATG 180693
>seq326
Length=563541
Score = 116 bits (128), Expect = 5e-21
Identities = 204/294 (69%), Gaps = 5/294 (2%)
Strand=Plus/Plus
Query 46891 TCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCC 46950
|| || | ||| ||||| || | ||| || |||| || || |||||||| ||
Sbjct 320402 TCCTTGATATACGTATCGATGAGAAGGGAGTAAGTTTCGGAGTGGATGTTTTCCATCATG 320461
Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010
||||| || ||||| || |||| || |||| | ||| || ||| | || || ||
Sbjct 320462 ATCTGGAAACCGTAGAAGCATCGGGCCTCAGGGACCTGGACTTCTCCGCTGAAACGCTC- 320520
Query 47011 GACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAAT 47069
||| | |||||||| || |||||||| || || || |||||||| || ||| ||
Sbjct 320521 GACGAGGTTCTCATTGACAATTCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGAT 320580
Query 47070 AAAATATTTTTCATCGGTAGTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATC 47126
|| ||| || || | ||| | |||| |||||||| | |||||| || | |||
Sbjct 320581 GAAGTATCGCTCGTCATCATTCAATCTATTGTTCCAGTCATGAAGATCTTTCGAGAGATC 320640
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180
|||||||| || ||||| || || ||||||||||| || ||||| | ||| ||
Sbjct 320641 AACTTCTTCTGCGGTCCAAAACGATGCCTCTGCTTTCTTGTACATTTGCCAGAT 320694
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712930915533120
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