Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201
6-08-25] 391 sequences; 29,442,093 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq246 156 1e-32
seq257 102 2e-16
seq12 87.8 4e-12
>seq246
Length=239075
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| || || ||||| || ||||| || || || || || |||||
Sbjct 189642 CAAATCTTCGTTAAAACCCTGACCGGAAAGACCATCACACTTGAAGTCGAGAGTTCAGAT 189583
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||| ||||| || |||||||| ||||| || || |||||
Sbjct 189582 ACGATTGACAATGTTAAATCAAAAATTCAAGATAAAGAAGGCATCCCCCCCGATCAGCAG 189523
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| |||||||||||||| || || ||||| | ||||| | |||||||| ||
Sbjct 189522 CGCCTTATTTTCGCCGGAAAACAACTTGAGGATGGTCGTACTCTCTCGGATTATAATATC 189463
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || ||||| ||
Sbjct 189462 CAAAAGGAGTCCACTCTTCATCTCGT 189437
Score = 136 bits (150), Expect = 1e-26
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| || || || ||||| || || || || || || ||||| ||
Sbjct 189414 CAAATCTTCGTTAAAACCCTGACCGGCAAAACTATTACGCTTGAAGTTGAGAGCTCCGAT 189355
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| || || || || || ||||| ||||| ||||| ||||||
Sbjct 189354 ACCATTGATAATGTTAAATCTAAAATCCAAGATAAGGAAGGTATCCCACCGGATCAGCAA 189295
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || ||||||||||| ||||| |||||||| | || || || ||
Sbjct 189294 CGTCTAATCTTTGCTGGTAAACAGCTCGAGGATGGTCGGACTCTTTCGGACTACAATATC 189235
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || || || || ||||| || |||||
Sbjct 189234 CAGAAGGAGAGCACTCTCCATCTGGTCCTGAGA 189202
Score = 129 bits (142), Expect = 1e-24
Identities = 150/201 (75%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| ||||||||||| || || || |||||||| |||||||| || || |||||||
Sbjct 189863 TCGTCAAAACTCTCACCGGTAAGACCATCACCCTAGAGGTGGAGTCATCCGATACCATCG 189804
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || || || || || |||||||| || ||||| |||||||| || || |
Sbjct 189803 ACAACGTTAAGTCGAAAATACAAGATAAAGAAGGCATTCCTCCAGACCAGCAGCGCCTAA 189744
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||||||||| || ||||| || || || | || ||| | ||||| || | || || |
Sbjct 189743 TCTTCGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTTTCTGATTACAATATTCAGAAGG 189684
Query 178111 AATCAACACTGCATCTTGTTT 178131
| || || || || |||| ||
Sbjct 189683 AGTCCACTCTTCA-CTTGGTT 189664
Score = 104 bits (114), Expect = 6e-17
Identities = 136/187 (73%), Gaps = 1/187 (1%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004
|| ||||| || || |||||||| || || || || ||||| | |||||
Sbjct 190157 ACCGGAAAGACTATAACCCTCGAAGTTGAGTCGGTTGATACAATCGATAGTGTCAAGTCC 190098
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|| ||||||||||| ||||| || ||||| ||||||||||| || || |||||||| ||
Sbjct 190097 AAAATTCAGGACAAGGAAGGGATTCCTCCTGACCAGCAACGTCTGATTTTCGCCGGCAAG 190038
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||| | || || || | || ||| | ||||||||| | || || || ||||| || ||
Sbjct 190037 CAGTTGGAGGACGGTCGCACCCTTTCTGATTATAACATTCAGAAGGAGTCAACTCTCCA- 189979
Query 178125 CTTGTTT 178131
|||| ||
Sbjct 189978 CTTGGTT 189972
>seq257
Length=236519
Score = 102 bits (112), Expect = 2e-16
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || ||||| || || || |||||||||||||| || | || ||||||
Sbjct 59186 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATC 59127
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || || || |||||||| || || ||||| || || ||||| ||| |
Sbjct 59126 GACAATGTAAAGTCGAAAATACAGGACAAGGAGGGTATCCCACCCGATCAGCAGCGATTG 59067
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| || || |||||||| || || | || || |||||||| |||| ||
Sbjct 59066 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGAACGCTAAGTGATTATAATATCCAGAA 59008
>seq12
Length=85050
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || ||||||||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct 76079 GACAAGGAGGGAATCCCTCCCGACCAGCAACGTCTGATCTTCGCCGGTAAACAGCTCGAG 76138
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | || || | || || ||| | || || || || || || || || ||
Sbjct 76139 GACGGTCGCACCCTCTCTGACTACAACATTCAGAAGGAGTCGACCCTCCACCTCGT 76194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203725169682854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |