Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713695.1_20201 6-08-25] 391 sequences; 29,442,093 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq246 109 5e-19 seq12 105 6e-18 seq257 86.0 6e-12 >seq246 Length=239075 Score = 109 bits (120), Expect = 5e-19 Identities = 112/145 (77%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||| || || || |||||||||||||||||| || || Sbjct 189954 GCCGCCACGAAGACGAAGAACCAAGTGGAGAGTTGACTCCTTCTGAATGTTATAATCAGA 190013 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| || | ||||||||||||||| ||||| || || ||||| | || Sbjct 190014 AAGGGTGCGACCGTCCTCCAACTGCTTGCCGGCGAAAATCAGACGTTGCTGGTCAGGAGG 190073 Query 41755 AACGCTCTCCTTGTCCATGATTTTT 41779 || | ||||||||| ||| |||| Sbjct 190074 AATCCCTTCCTTGTCC-TGAATTTT 190097 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| |||||||||||| || || || || Sbjct 189647 CCTCCACGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATATTGTAATCAGAA 189706 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||||||||| || |||||||| ||||| | ||| Sbjct 189707 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGAGGA 189766 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || || ||| | || |||| | | |||| | | | || ||| |||||||| Sbjct 189767 ATGC-CTTCTTTATCTTGTATTTTCGACTTAACGTTGTCGATGGTATCGGATGACTCCAC 189825 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || ||||| || || || || |||| Sbjct 189826 CTCTAGGGTGATGGTCTTACCGGTGAGAGTTTTGACGA 189863 >seq12 Length=85050 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || ||||| | || || || || || ||||||||||||||| ||||| Sbjct 76215 CCACCACCACGAAGACGCAGGACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCA 76156 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||| || |||||||| ||||| || || ||||| | Sbjct 76155 GAGAGGGTGCGACCGTCCTCGAGCTGTTTACCGGCGAAGATCAGACGTTGCTGGTCGGGA 76096 Query 41753 GGAACGCTCTCCTTGTCCATG 41773 || | | ||||||||| ||| Sbjct 76095 GGGATTCCCTCCTTGTCTATG 76075 >seq257 Length=236519 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/183 (71%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| || ||||| || || || || |||| |||||||||||||| ||||| | Sbjct 59006 CCTTCTGGATATTATAATCACTTAGCGTTCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGA 59065 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| || || | || | | |||||||||| ||||| ||| || | Sbjct 59066 TCAATCGCTGCTGATCGGGTGGGATACCCTCCTTGTCCTGTATTTTCGACTTTACATTGT 59125 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | || ||||| ||||| ||||| | || || || || ||||| || ||||| || Sbjct 59126 CG--ATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 59183 Query 41851 GAA 41853 ||| Sbjct 59184 GAA 59186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301740489200