Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 >seq4 Length=3244807 Score = 158 bits (174), Expect = 1e-33 Identities = 447/674 (66%), Gaps = 12/674 (2%) Strand=Plus/Plus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 ||||| | || | |||||| || | || | || || ||||| || || || || | | Sbjct 1908486 GGACAAAACAGAGTCCACTCGCCATTCTCTTGGACACGCTTCATGAACAGGTCCGGTACC 1908545 Query 54056 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 54114 |||||||| ||| || || || | | | ||||| || || |||||| | Sbjct 1908546 CAAAGAGC-ATAGAACAGGTCACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAA 1908604 Query 54115 ATCGAGGAACGCCATA-ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAG 54173 || ||||| || | | | || | |||||||| |||| ||| |||| | | || | Sbjct 1908605 GTCAAGGAA-GCTAAACACGTCTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCG 1908663 Query 54174 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 54233 | || ||||| || ||||| || | ||| ||||| ||||| || || || | | ||| | Sbjct 1908664 GACGCTTGTTGCCACCCTGGTCAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAG 1908723 Query 54234 GAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT-- 54291 |||| | ||| ||||| | ||| ||||| || ||| || || |||||||||| Sbjct 1908724 GAATGAGACCGTTGGAGGTACCGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGC 1908783 Query 54292 ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT-A 54350 | | | || | |||| || || || || | || ||||| | ||||| ||| || | Sbjct 1908784 AGTGCACGTTCA--GACCAATACCGCCAGCAGTCTTGGAGATCATGGCGCA-CGTCTTCA 1908840 Query 54351 ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA 54410 |||| || ||||| ||||| || || || ||| |||||| | || || || |||| Sbjct 1908841 ACGTGTCGTAGATACCCTCGATGCTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACA 1908900 Query 54411 TTTGGTGACGACTA-GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 54469 |||| || ||| || |||||||| || | || || ||||||||||| || | || Sbjct 1908901 TTTGAGGA-GACGGTGTACCCGCATTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTC 1908959 Query 54470 TCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACT 54529 | || | | | ||| ||||||||||| || |||||| || || || || Sbjct 1908960 TGCGACATCATGTCGTAGGTCTCGATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACA 1909019 Query 54530 GCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAG 54589 || |||||||| | ||||||||| || | || | | |||| || || || | | Sbjct 1909020 GCTACACGCATCAGCATGTGCTGTGGACGCTCGGCTACCTTGCCATTGATGCGGAGAAGG 1909079 Query 54590 TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATA 54649 || ||| |||| || || || ||||| | | ||| ||||| || ||||| | | Sbjct 1909080 TATGATCGCTCCAGGGTCTTGAACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACA 1909139 Query 54650 ATAACTGAGTTGAG 54663 ||| | |||||||| Sbjct 1909140 ATAGCCGAGTTGAG 1909153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721147287280