Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 4e-20
seq11 91.5 1e-13
>seq1
Length=5402283
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||| ||||| ||||| |||||||| ||||| | || || || ||||
Sbjct 3267011 AGCACCAAGTGCAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGCGTACGGCCGTCT 3266952
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||| ||| ||||| || | || || | |||||| ||| || | || ||||||||
Sbjct 3266951 TCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGATCCGGAGGAATACCCTCCTTGTCT 3266892
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||||| ||||| | | ||| ||||| | ||| ||| | ||| ||||||
Sbjct 3266891 TGAATCTTGGACTTCACGTTGTCGATGGTATCGGATGACTCGACTTCGAGGGTGATGGTC 3266832
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| ||||| |||||||| || |||||
Sbjct 3266831 TTGCCGGTCAACGTCTTGACAAAGATCTGCAT 3266800
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | |||||||| |||| || |||||||| || || || ||||| |
Sbjct 3267254 CCGCCACGCAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 3267195
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||| |||| ||| ||||| || | || || | |||||||||| |||
Sbjct 3267194 AGCGTACGGCCGTCTTCCAACTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCCGGGGGA 3267135
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| ||||| | ||| || || | ||||
Sbjct 3267134 ATGCCTTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACC 3267075
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||| ||||| | || ||||| || || |||||
Sbjct 3267074 TCCAGTGTGATCGTCTTACCGGTGAGAGTCTTGACGAAAATCTGCAT 3267028
>seq11
Length=1384065
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || |||| |||| || |||||||| || ||||| ||||| |
Sbjct 1031212 CCGCCGCGCAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1031271
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | |||||||||| ||
Sbjct 1031272 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 1031331
Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091
| |||||||||||| ||||||
Sbjct 1031332 ATGCCTTCCTTGTCCTGGATCTT 1031354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258886076676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |