Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq8 199 4e-46
seq1 122 9e-23
seq11 113 5e-20
seq7 104 2e-17
>seq8
Length=2222996
Score = 199 bits (220), Expect = 4e-46
Identities = 216/283 (76%), Gaps = 5/283 (2%)
Strand=Plus/Minus
Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698
|||| |||||||| |||||||| || || |||||||||| ||||||| | || ||||||
Sbjct 706065 TGGCAAATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATCGATCTGTCC 706006
Query 116699 AAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755
||||| | ||||||| | |||| | || ||| |||||||| |||||| |||
Sbjct 706005 AAGGATCTGCACGACTGGAACAAGCGCCTCAATGACGACGAGCGCTTCTTCATCTCACAC 705946
Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815
|| || ||||| ||||| || ||||| |||||||||||||| |||||||||| |||
Sbjct 705945 GTCCTTGCCTTCTTCGCTGCATCGGACGGTATCGTCAACGAGAACTTGGTCGAGCGATTC 705886
Query 116816 -GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874
|| || |||| ||| | |||||||||| |||||||||||||| |||||| |||||
Sbjct 705885 AGCGGAG-AGGTTCAGATCCCCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGATGGA 705827
Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||| | ||||| || | || || | | |||||||| |||
Sbjct 705826 GAACATCCACTCCGAGACATACTCCCTCTTGATCGACACATAC 705784
Score = 196 bits (216), Expect = 5e-45
Identities = 328/468 (70%), Gaps = 5/468 (1%)
Strand=Plus/Minus
Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028
|| ||| |||| |||||||||| ||||| ||||| |||||| | | || | || ||
Sbjct 705680 CCCTGCATCAAGAAGAAGGCCGACTGGGCTCTGCGATGGATCTCTGACAAGAACTCCACC 705621
Query 117029 TTCGGCGA-GCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTT 117087
|||| ||| ||| || | || ||||| ||||||||||| ||||||| ||| ||
Sbjct 705620 TTCG-CGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCTCCTT 705562
Query 117088 CGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGA 117147
|| |||| || ||||||||||| || ||||||||||| || || || ||| ||||||
Sbjct 705561 TGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCAACGA 705502
Query 117148 GCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTT 117207
||||||||| | |||||||| |||| ||||| ||||| | || ||| | |
Sbjct 705501 GCTCATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTCCCTCCT 705442
Query 117208 GGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGA 117267
| || || | | || |||| || ||| ||||| | || || | ||||||
Sbjct 705441 CAAGACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTTGTCATCGA 705382
Query 117268 GCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGA 117326
| || |||||||| || |||||||| |||| ||||| || | || | | |
Sbjct 705381 GAAGGAGTTCCTCACTGACGCGCTGCC-CTGCGCCCTGCTCGGCATGAACTCCACTCTTA 705323
Query 117327 TGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGC 117386
||| || ||||||||||||||||||||| | ||||| || | || | | | |||||
Sbjct 705322 TGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGGCTCTCGGCAACACCAAGG 705263
Query 117387 ACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC-CTTG 117433
||||||| || ||||||| | ||||| ||| | |||||| ||||
Sbjct 705262 TCTACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTG 705215
>seq1
Length=5402283
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || ||| | || ||||| ||||||||| |||| ||||| | ||
Sbjct 3266800 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCC 3266859
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | ||| || |||| ||||| ||||| || || |||| ||
Sbjct 3266860 GATACCATCGACAACG-TGAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCA 3266918
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||||| ||| ||||| ||| |||| |||| || || || |||||||||
Sbjct 3266919 GCAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAA 3266978
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||| |||||||| |||| |||||
Sbjct 3266979 CATTCAGAAGGAATCCACCCTGCA 3267002
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| || || || ||||| | || || || | ||
Sbjct 3267028 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACGATCACACTGGAGGTGGAGTCATCC 3267087
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | | ||| || || | ||||| || ||||| ||| ||||||||
Sbjct 3267088 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 3267147
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| ||| |||| |||| || || || |||||||||
Sbjct 3267148 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAAT 3267207
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | || ||||| | ||| | || || | ||||||
Sbjct 3267208 ATCCAGAAGGAGTCTACCCTGCACTTGGTGCTCCGTCTGCGTGGCGGC 3267255
Score = 111 bits (122), Expect = 2e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| ||||||||| | || || || | |||||| | | | | |||||
Sbjct 3266313 ACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 3266372
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| || | ||||| ||||||||||| ||||||||||||| | |||| ||| |||||
Sbjct 3266373 AAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAACGCTTGATCTTCGCCGGCAAG 3266432
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
||||| || || | |||||||| || ||||||||||||||||| | ||||| ||
Sbjct 3266433 CAGCTCGAGGATGGTCGCACCCTGTCTGATTACAACATCCAGAAGGAATCGACGCTCCAC 3266492
Query 40894 CTAGTGTTGCGCTTGAGGGGCGGC 40917
|| || | ||| || | || |||
Sbjct 3266493 CTCGTCCTCCGCCTGCGCGGTGGC 3266516
Score = 111 bits (122), Expect = 2e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAAG 40770
|||||||||| ||||| || |||| || ||| | | |||| | || |||| |||||
Sbjct 3266594 TCACGGGCAAGACCATTACGCTCGAAGTTGAATCGTCTGACACGATTGACAACG-TCAAG 3266652
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | || || ||||| || || |||||||||| || | |||| ||| |||
Sbjct 3266653 TCGAAGATCCAGGATAAGGAGGGTATTCCTCCGGACCAGCAGCGCTTGATCTTCGCCGGC 3266712
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || || | |||||||| |||||||||||| ||||||||| | || ||
Sbjct 3266713 AAGCAGCTTGAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACACTC 3266772
Query 40891 CATCTAGTGTTGCGC 40905
||||| || |||||
Sbjct 3266773 CATCTCGTCCTGCGC 3266787
>seq11
Length=1384065
Score = 113 bits (124), Expect = 5e-20
Identities = 91/110 (83%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || |||||||| |||||||||| || || |||| ||| ||||| ||||| ||
Sbjct 1031345 GACAAGGAAGGCATCCCGCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1031286
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|||| ||||||||| |||||||||||||||||||||| | || |||||
Sbjct 1031285 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTGCA 1031236
>seq7
Length=2328918
Score = 104 bits (114), Expect = 2e-17
Identities = 89/110 (81%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| || ||| |||||||||| || ||||||| ||| || || ||||| ||
Sbjct 679448 GACAAGGAGGGAATTCCCCCGGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAG 679389
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
|| | ||||||||| |||||||||||||||||||||| | || || ||
Sbjct 679388 GATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACACTCCA 679339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218807145360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |