Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 430 1e-115
seq8 134 1e-26
seq1 114 1e-20
>seq4
Length=3244807
Score = 430 bits (476), Expect = 1e-115
Identities = 1212/1849 (66%), Gaps = 30/1849 (2%)
Strand=Plus/Plus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
|||| || || || |||| || |||||||| || | |||||| || ||| || || |
Sbjct 1907317 TGGTTCGTAGGTAGTACAATCCAGTCTTCAGCCCAAGCTTCCAACCGGCAAAGTGCATGG 1907376
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
|||| | || || | ||| | ||| | | || | ||||||| ||||||||
Sbjct 1907377 ACGTGATCTTGCCCATGGTAGGCTCCTTCATATGAATGTTCAGCGACTGAGACTGATCGA 1907436
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
| || || || || || |||| ||| | || | ||||| ||| |||||||| ||||
Sbjct 1907437 TGAAGGCACCACGGTCAGCGGACATCTGAATGATGTTACGCTGCGAGATTTCCCAAACGG 1907496
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTA 22381
|||||||||| | ||||||| | ||| | | | | || | ||||| ||| || |
Sbjct 1907497 TCTTGTACAGGGCCTTGATCTC-ATCGGGAATGTTGGGGATGCGCTGGATGGAACCACCA 1907555
Query 22382 TTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTG 22441
| | ||||| || || || | || ||| | || ||| || | ||| |||
Sbjct 1907556 TCGGCGATGATTCGGTTCTTCATGTTGTCTGACCAGAGGCCCATGTCGACAAGATCCTTG 1907615
Query 22442 ACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTG 22501
| || | |||| || || || ||||| || | ||| ||||| || ||| ||||||
Sbjct 1907616 AGCAACCAAGGGTTGACGACCTGGAACTCACCAGCCAACACGCGACGAGAGTAGATGTTG 1907675
Query 22502 GATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGC 22561
|| ||| | || ||||| | || |||| || || ||||| | || || || ||||||
Sbjct 1907676 GAAGTGTAGGGCTCGAAGCACTCGTTGTACCCGAGGATCTGCGAAGTAGAGGCTGTCGGC 1907735
Query 22562 ATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATC 22621
|| || |||| || | ||||| | | ||||||| | ||| || ||| | |
Sbjct 1907736 ATGGGTGCCACGAGCAAAGAGTTGCGGACACCGTGCTGGGCAATCTTCTCCTTCAAAGAC 1907795
Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681
| ||||||||||| |||| || || || || |||||| |||||||| | | |||
Sbjct 1907796 GCCCAGTCCCACAAGTCGGTGGGGGTGACGTT---CCACATGTCGTATTGGAGAATGCCC 1907852
Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAG 22741
|| | || ||||| || || |||||||| || | ||| || ||||||
Sbjct 1907853 TGAGAAACAGGAGACCCTTCATATGTCTCGTACGGTCCGAGCTCCTTGGCCAGGTCGCAG 1907912
Query 22742 CTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG 22801
|| ||| || ||| || || ||||| ||||| | |||| | || ||
Sbjct 1907913 GACGAAGTCAAAGCTGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGTTTCTTAGCC 1907972
Query 22802 GCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCT 22861
|| |||| | |||||||| | || ||| | || || | ||| || || ||
Sbjct 1907973 TCGGGAGATTCGAAAGGCATACGAAGAGACAGGAAGGTATCAGCAAGACCTTGTACACCG 1908032
Query 22862 ATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTG--CCTCGGGCAAAGGATACCAAT 22919
| ||||| || |||| | | || | ||| | |||| || | || || |
Sbjct 1908033 AGACCGACGGGCCGGTGCCTGAAGTTG--CTCTTACGAGCCTCCGGGACGGGGTAGTGGT 1908090
Query 22920 TCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNT 22979
| ||||| | |||||||||| | || ||||| | || | |
Sbjct 1908091 TGACCTCGATGATCTTGTTCAAGTTGCGAGTGACAATCTGAGTGACTTCGTGAAGCTTCT 1908150
Query 22980 CAAAGTCGTAAACGCCCGATTGTACA-----ACAAACTTGTTGACGGCGATCGAGGCAAG 23034
||||| | ||||| ||| | | |||||| | || ||||| ||||||||
Sbjct 1908151 GGAAGTCAAACACGCC--ATTCTTCTCGTCGACAAACCTAGGGAGGGCGAGAGAGGCAAG 1908208
Query 23035 ATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCT 23094
|||||||||||| |||||||| || |||||||| | || || || || || |||
Sbjct 1908209 ATTGCATACGGCGACCTCGTCAGGGGCGGTGTACTCGATGATCTCAGTGCAGAGGTTGGA 1908268
Query 23095 ACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAG 23154
| || || || | || ||||||| || || || ||||| | |||||||||||
Sbjct 1908269 GCTGCGGATAGTTCCGAGGTTCTTCTGGTTACTCTTGCGGTTGCAAGCGTCCTTGTAGAG 1908328
Query 23155 CATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGC 23214
|||||| || | || ||||| ||| | ||||| ||| || ||||| |||| ||
Sbjct 1908329 CATGTAGGGGTTTCCGGTCTCAGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTGGGC 1908388
Query 23215 GTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATT 23273
| | ||| ||||| | | ||| || | |||||| | ||||| || || || |
Sbjct 1908389 ACGGATG-GTCTCACGTCCACGGCCCTCAGCTTCGTACCTGGCGTACAGAGCCTCGAACT 1908447
Query 23274 CGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATT 23332
| ||||||| ||| || || || || || | | | ||||| | ||| ||||| |
Sbjct 1908448 CCTCACCGTAGACA-TCTGCGAGACCAGGGGCCTCGCTGGGACAAAACAGAGTCCAC-TC 1908505
Query 23333 G--AGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTT 23390
| | || | || || || |||| || || ||||||| ||| ||||| |||||||| |
Sbjct 1908506 GCCATTC-TCTTGGACACGCTTCATGAACAGGTCCGGTACCCAAAGAGCATAGAACAGGT 1908564
Query 23391 CGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGT 23450
| || || || |||||||| |||||| ||||||| ||| || | ||| |||||||
Sbjct 1908565 CACGCGCACGTACCTCCTCCTTGCCGTGGTTCTTTCGCAAGTCAAGGAAGCTAAACACGT 1908624
Query 23451 CCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGAT 23510
| || ||||||||||| ||||| | ||| || || ||||| | ||| ||||| ||||| |
Sbjct 1908625 CTGCGTGCCACGGCTCCAGGTAGATGGCGAAGGCACCCGGACGCTTGTTGCCACCCTGGT 1908684
Query 23511 CGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGC 23570
| ||||| | || ||||||||||| || | ||||| || | |||||||||||| | |
Sbjct 1908685 CAACGTACCTAGCAGTGTTGTTGTAGACACGAAGCATAGGAATGAGACCGTTGGAGGTAC 1908744
Query 23571 CGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGC 23630
|| || | | || || | || |||| | ||| |||| | ||| || |
Sbjct 1908745 CGTTGGTTCCTCCGATGTATGAGCCGGTGGCACGAATGCAGTGCACGTTCAGACCAATAC 1908804
Query 23631 CTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGC 23690
| || | | || || ||||| ||||| |||| ||||||||||| ||||||||||
Sbjct 1908805 CGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCGATGC 1908864
Query 23691 TGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCG 23750
|||| || || | ||| || ||| || || |||||||| | || ||| | ||
Sbjct 1908865 TGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCAT 1908924
Query 23751 AGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGA 23810
||| ||||| || |||||||| ||| | | |||||| | | ||| || ||||
Sbjct 1908925 TGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCGA 1908984
Query 23811 TGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAG 23870
| || ||||| ||||| ||||| || || | || || ||||||| ||||| || |
Sbjct 1908985 TAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGTG 1909044
Query 23871 GTCTCTCG---ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAA 23927
| | |||| ||| | ||| || || || || ||||| || | || || || |
Sbjct 1909045 GACGCTCGGCTACCTT---GCCATTGATGCGGAGAAGGTATGATCGCTCCAGGGTCTTGA 1909101
Query 23928 ATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976
| ||||| | | ||||| ||||| || |||| || || ||||| ||
Sbjct 1909102 ACCCAAAGAATTGGTAGTTGAAGTCGCGGTCGTATACAATAGCCGAGTT 1909150
>seq8
Length=2222996
Score = 134 bits (148), Expect = 1e-26
Identities = 301/445 (68%), Gaps = 18/445 (4%)
Strand=Plus/Minus
Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017
|||| ||||| | | || ||||| |||||||||||||| ||||| ||||| |||
Sbjct 705625 CCACCTTCGCGACGCGTCTCATCGCATTCGCCGCCGTCGAGGGTATCTTCTTCAGCGGCT 705566
Query 58018 GCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCA 58077
||||||| | || || ||| | ||||| || ||||| ||||| || || || || ||
Sbjct 705565 CCTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTTACCTTCTCCA 705506
Query 58078 ACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTC 58137
||||| | || || || |||||||| | || ||||| || || ||||| | | |||
Sbjct 705505 ACGAGCTCATCTCTCGTGACGAGGGCATGCACACTGACTTCGCCTGCCTCCTCTTCTC-- 705448
Query 58138 ACATTGTCAATAAACCGACGCG----GGATCGCATCTTGGACATTATCACCGAGGCGGTC 58193
| | |||| | ||| | | | | | | || || || |||||| |||| ||
Sbjct 705447 -CCTCCTCAA-GACCCGCCCTGACAAGAAGCTCGTCGAAGATATCATCACCCAGGCCGTT 705390
Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253
| ||||| || ||||| |||| || || || || ||| ||||||| ||||||
Sbjct 705389 GTCATCGAGAAGGAGTTCCTCACTGACGCGCTGCCCTGCGCCCTGCTCGGCATGAACTCC 705330
Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG- 58312
| | |||| ||||||| ||||| || |||||| | || | || | || | ||
Sbjct 705329 ACTCTTATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCCTGG--CT-CTCGGC 705273
Query 58313 -AGAGC---GTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCG 58368
| | | ||| |||||| ||| || || || || || ||| | |||||||| |
Sbjct 705272 AACACCAAGGTC--TACAACGCGACCAACCCCTTCGACTTCATGGAGAACATCTCGCTTG 705215
Query 58369 AGGGCAAGACAAACTTTTTCGAAAA 58393
|||||||| ||||| ||||| ||
Sbjct 705214 CCGGCAAGACCAACTTCTTCGAGAA 705190
>seq1
Length=5402283
Score = 114 bits (126), Expect = 1e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || || || |||||||| | || || || | |||
Sbjct 3267028 ATGCAGATTTTCGTCAAGACTCTCACCGGTAAGACGATCACACTGGAGGTGGAGTCATCC 3267087
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || || || ||||||||||||| | || || ||||||
Sbjct 3267088 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACCAG 3267147
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
|||||||| || ||||| ||||| ||||||||||||
Sbjct 3267148 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGAC 3267183
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| |||| ||||| || |||||| |||| || || | |||
Sbjct 3266800 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCATCC 3266859
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || |||||||| || | || || || |||
Sbjct 3266860 GATACCATCGACAACGTGAAGTCCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCAG 3266919
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| ||||| |||||||||||| || | ||| || |||
Sbjct 3266920 CAGCGTCTCATCTTCGCAGGCAAGCAGTTGGAAGACGGCCGTACGCTTTCCGACTACAAC 3266979
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| || || || |||| ||| | || | |||||||
Sbjct 3266980 ATTCAGAAGGAATCCACCCTGCACTTGGTGCTTCGTCTCCGTGGCGGTA 3267028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766060103120
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