Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 4e-12 >seq4 Length=3244807 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||||||||||||||| || || | ||| | || || || |||||||| ||| Sbjct 1908804 CCGCCAGCAGTCTTGGAGATCATGGCGCACGTCTTCAACGTGTCGTAGATACCCTCGATG 1908863 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | | |||||||| || || | ||| || | ||| || | Sbjct 1908864 CTGTCTTCCTTCATGTCGATCAGGAAGCAAGACGACATTTGAGGAGACGGTGTACCCGCA 1908923 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || || ||||| || ||||| || || || | | | |||||| | || || || || Sbjct 1908924 TTGAAAAGTGTTGGCGAAGCGTGCGTGAAGAACTTCTGCGACATCATGTCGTAGGTCTCG 1908983 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || | | || || ||||| ||||| ||||| |||||||| | ||||| ||| Sbjct 1908984 ATAGCCTTCTCAATATCCTCGCCGTGGATGCCCACAGCTACACGCATCAGCATGTGCTGT 1909043 Query 95032 GGGCGCTC 95039 || ||||| Sbjct 1909044 GGACGCTC 1909051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583226578255